Literature DB >> 19653299

The structure of a putative S-formylglutathione hydrolase from Agrobacterium tumefaciens.

Karin E van Straaten1, Claudio F Gonzalez, Ricardo B Valladares, Xiaohui Xu, Alexei V Savchenko, David A R Sanders.   

Abstract

The structure of the Atu1476 protein from Agrobacterium tumefaciens was determined at 2 A resolution. The crystal structure and biochemical characterization of this enzyme support the conclusion that this protein is an S-formylglutathione hydrolase (AtuSFGH). The three-dimensional structure of AtuSFGH contains the alpha/beta hydrolase fold topology and exists as a homo-dimer. Contacts between the two monomers in the dimer are formed both by hydrogen bonds and salt bridges. Biochemical characterization reveals that AtuSFGH hydrolyzes C--O bonds with high affinity toward short to medium chain esters, unlike the other known SFGHs which have greater affinity toward shorter chained esters. A potential role for Cys54 in regulation of enzyme activity through S-glutathionylation is also proposed.

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Year:  2009        PMID: 19653299      PMCID: PMC2786982          DOI: 10.1002/pro.216

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  26 in total

1.  Data mining crystallization databases: knowledge-based approaches to optimize protein crystal screens.

Authors:  Matthew S Kimber; François Vallee; Simon Houston; Alexander Necakov; Tatiana Skarina; Elena Evdokimova; Steven Beasley; Dinesh Christendat; Alexei Savchenko; Cheryl H Arrowsmith; Masoud Vedadi; Mark Gerstein; Aled M Edwards
Journal:  Proteins       Date:  2003-06-01

2.  MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes.

Authors:  Ian W Davis; Laura Weston Murray; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

3.  Automated search-model discovery and preparation for structure solution by molecular replacement.

Authors:  Ronan M Keegan; Martyn D Winn
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-03-16

4.  Purification and properties of S-formylglutathione hydrolase from human liver.

Authors:  L Uotila; M Koivusalo
Journal:  J Biol Chem       Date:  1974-12-10       Impact factor: 5.157

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  S-formylglutathione hydrolase of Paracoccus denitrificans is homologous to human esterase D: a universal pathway for formaldehyde detoxification?

Authors:  N Harms; J Ras; W N Reijnders; R J van Spanning; A H Stouthamer
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

7.  Structural characterization and reversal of the natural organophosphate resistance of a D-type esterase, Saccharomyces cerevisiae S-formylglutathione hydrolase.

Authors:  Patricia M Legler; Desigan Kumaran; Subramanyam Swaminathan; F William Studier; Charles B Millard
Journal:  Biochemistry       Date:  2008-08-16       Impact factor: 3.162

8.  Crystal structure of human esterase D: a potential genetic marker of retinoblastoma.

Authors:  Dong Wu; Yang Li; Gaojie Song; David Zhang; Neil Shaw; Zhi-Jie Liu
Journal:  FASEB J       Date:  2009-01-06       Impact factor: 5.191

9.  Evidence that S-formylglutathione hydrolase and esterase D polymorphisms are identical.

Authors:  F Apeshiotis; K Bender
Journal:  Hum Genet       Date:  1986-10       Impact factor: 4.132

10.  Identity of the polymorphisms for esterase D and S-formylglutathione hydrolase in red blood cells.

Authors:  H Eiberg; J Mohr
Journal:  Hum Genet       Date:  1986-10       Impact factor: 4.132

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  8 in total

1.  A glutathione-dependent detoxification system is required for formaldehyde resistance and optimal survival of Neisseria meningitidis in biofilms.

Authors:  Nathan H Chen; Rafael M Couñago; Karrera Y Djoko; Michael P Jennings; Michael A Apicella; Bostjan Kobe; Alastair G McEwan
Journal:  Antioxid Redox Signal       Date:  2012-11-20       Impact factor: 8.401

2.  Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica.

Authors:  Sofia Lemak; Anatoli Tchigvintsev; Pierre Petit; Robert Flick; Alexander U Singer; Greg Brown; Elena Evdokimova; Olga Egorova; Claudio F Gonzalez; Tatyana N Chernikova; Michail M Yakimov; Michael Kube; Richard Reinhardt; Peter N Golyshin; Alexei Savchenko; Alexander F Yakunin
Journal:  Biochem J       Date:  2012-07-15       Impact factor: 3.857

3.  Thioesterase enzyme families: Functions, structures, and mechanisms.

Authors:  Benjamin T Caswell; Caio C de Carvalho; Hung Nguyen; Monikrishna Roy; Tin Nguyen; David C Cantu
Journal:  Protein Sci       Date:  2022-01-04       Impact factor: 6.725

Review 4.  Metabolic Shades of S-D-Lactoylglutathione.

Authors:  Miklós Péter Kalapos; Cinzia Antognelli; Lidia de Bari
Journal:  Antioxidants (Basel)       Date:  2022-05-20

5.  Regulation of S-formylglutathione hydrolase by the anti-aging gene klotho.

Authors:  Yuechi Xu; Zhongjie Sun
Journal:  Oncotarget       Date:  2017-07-08

6.  Purification and partial characterization of LdtP, a cell envelope modifying enzyme in Liberibacter asiaticus.

Authors:  Janelle F Coyle; Fernando A Pagliai; Dan Zhang; Graciela L Lorca; Claudio F Gonzalez
Journal:  BMC Microbiol       Date:  2018-11-29       Impact factor: 3.605

7.  Structural and functional characterization of a novel cold-active S-formylglutathione hydrolase (SfSFGH) homolog from Shewanella frigidimarina, a psychrophilic bacterium.

Authors:  Chang Woo Lee; Wanki Yoo; Sun-Ha Park; Ly Thi Huong Luu Le; Chang-Sook Jeong; Bum Han Ryu; Seung Chul Shin; Han-Woo Kim; Hyun Park; Kyeong Kyu Kim; T Doohun Kim; Jun Hyuck Lee
Journal:  Microb Cell Fact       Date:  2019-08-19       Impact factor: 5.328

8.  Diversity and Expression of Bacterial Metacaspases in an Aquatic Ecosystem.

Authors:  Johannes Asplund-Samuelsson; John Sundh; Chris L Dupont; Andrew E Allen; John P McCrow; Narin A Celepli; Birgitta Bergman; Karolina Ininbergs; Martin Ekman
Journal:  Front Microbiol       Date:  2016-07-06       Impact factor: 5.640

  8 in total

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