Literature DB >> 19652358

Crystallization and preliminary X-ray analysis of the LOV domain of the blue-light receptor YtvA from Bacillus amyloliquefaciens FZB42.

Hideaki Ogata1, Zhen Cao, Aba Losi, Wolfgang Gärtner.   

Abstract

Light-oxygen-voltage (LOV) proteins play an important role in blue-light-dependent physiological processes in many organisms. The LOV domain of the blue-light receptor YtvA from Bacillus amyloliquefaciens FZB42 has been purified and crystallized at 277 K using the sitting-drop vapour-diffusion method with 2-ethoxyethanol as a precipitant. A data set was collected to 1.60 A resolution from a single crystal at 100 K using synchrotron radiation. The LOV domain of YtvA crystallized in space group C222(1), with unit-cell parameters a = 64.95, b = 83.76, c = 55.81 A. The crystal structure of the LOV domain of YtvA was determined by the molecular-replacement method. The crystal contained one molecule per asymmetric unit, with a Matthews coefficient (V(M)) of 3.04 A(3) Da(-1); the solvent content was estimated to be 59.5%.

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Year:  2009        PMID: 19652358      PMCID: PMC2720352          DOI: 10.1107/S1744309109026670

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  The STAS domain - a link between anion transporters and antisigma-factor antagonists.

Authors:  L Aravind; E V Koonin
Journal:  Curr Biol       Date:  2000-01-27       Impact factor: 10.834

2.  Conformational analysis of the blue-light sensing protein YtvA reveals a competitive interface for LOV-LOV dimerization and interdomain interactions.

Authors:  Valentina Buttani; Aba Losi; Thorsten Eggert; Ulrich Krauss; Karl-Erich Jaeger; Zhen Cao; Wolfgang Gärtner
Journal:  Photochem Photobiol Sci       Date:  2006-10-27       Impact factor: 3.982

3.  Blue news: NTP binding properties of the blue-light sensitive YtvA protein from Bacillus subtilis.

Authors:  Valentina Buttani; Aba Losi; Eugenia Polverini; Wolfgang Gärtner
Journal:  FEBS Lett       Date:  2006-06-15       Impact factor: 4.124

4.  Structural basis for light-dependent signaling in the dimeric LOV domain of the photosensor YtvA.

Authors:  Andreas Möglich; Keith Moffat
Journal:  J Mol Biol       Date:  2007-08-02       Impact factor: 5.469

Review 5.  Bacterial bilin- and flavin-binding photoreceptors.

Authors:  A Losi; W Gärtner
Journal:  Photochem Photobiol Sci       Date:  2008-09-05       Impact factor: 3.982

6.  New family of regulators in the environmental signaling pathway which activates the general stress transcription factor sigma(B) of Bacillus subtilis.

Authors:  S Akbar; T A Gaidenko; C M Kang; M O'Reilly; K M Devine; C W Price
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

7.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

8.  Blue light activates the sigmaB-dependent stress response of Bacillus subtilis via YtvA.

Authors:  Marcela Avila-Pérez; Klaas J Hellingwerf; Remco Kort
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

9.  First evidence for phototropin-related blue-light receptors in prokaryotes.

Authors:  Aba Losi; Eugenia Polverini; Benjamin Quest; Wolfgang Gärtner
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

10.  Structural basis of the LOV1 dimerization of Arabidopsis phototropins 1 and 2.

Authors:  Masayoshi Nakasako; Kazunori Zikihara; Daisuke Matsuoka; Hitomi Katsura; Satoru Tokutomi
Journal:  J Mol Biol       Date:  2008-06-18       Impact factor: 5.469

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  5 in total

1.  Gram-positive rhizobacterium Bacillus amyloliquefaciens FZB42 colonizes three types of plants in different patterns.

Authors:  Ben Fan; Rainer Borriss; Wilfrid Bleiss; Xiaoqin Wu
Journal:  J Microbiol       Date:  2012-02-27       Impact factor: 3.422

2.  Blue-Light Inhibition of Listeria monocytogenes Growth Is Mediated by Reactive Oxygen Species and Is Influenced by σB and the Blue-Light Sensor Lmo0799.

Authors:  Beth O'Donoghue; Kerrie NicAogáin; Claire Bennett; Alan Conneely; Teresa Tiensuu; Jörgen Johansson; Conor O'Byrne
Journal:  Appl Environ Microbiol       Date:  2016-06-13       Impact factor: 4.792

3.  Blue and red light modulates SigB-dependent gene transcription, swimming motility and invasiveness in Listeria monocytogenes.

Authors:  Nicolai Ondrusch; Jürgen Kreft
Journal:  PLoS One       Date:  2011-01-11       Impact factor: 3.240

4.  Light-induced structural changes in a short light, oxygen, voltage (LOV) protein revealed by molecular dynamics simulations-implications for the understanding of LOV photoactivation.

Authors:  Marco Bocola; Ulrich Schwaneberg; Karl-Erich Jaeger; Ulrich Krauss
Journal:  Front Mol Biosci       Date:  2015-10-01

Review 5.  From Plant Infectivity to Growth Patterns: The Role of Blue-Light Sensing in the Prokaryotic World.

Authors:  Aba Losi; Carmen Mandalari; Wolfgang Gärtner
Journal:  Plants (Basel)       Date:  2014-01-27
  5 in total

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