Literature DB >> 19649610

PASE: a web-based platform for peptide/protein microarray experiments.

Fabien Pamelard1, Gael Even, Costin Apostol, Cristian Preda, Clarisse Dhaenens, Vronique Fafeur, Rémi Desmet, Oleg Melnyk.   

Abstract

Peptide microarray technology requires bioinformatics and statistical tools to manage, store, and analyze the large amount of data produced. To address these needs, we developed a system called protein array software environment (PASE) that provides an integrated framework to manage and analyze microarray information from polypeptide chip technologies.

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Year:  2009        PMID： 19649610     DOI： 10.1007/978-1-60327-394-7_24

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  6 in total

1.  Peptide microarray analysis of in silico-predicted epitopes for serological diagnosis of Toxoplasma gondii infection in humans.

Authors:  Pavlo Maksimov; Johannes Zerweck; Aline Maksimov; Andrea Hotop; Uwe Gross; Uwe Pleyer; Katrin Spekker; Walter Däubener; Sandra Werdermann; Olaf Niederstrasser; Eckhardt Petri; Marc Mertens; Rainer G Ulrich; Franz J Conraths; Gereon Schares
Journal:  Clin Vaccine Immunol       Date:  2012-04-11

2.  Identification of the feline humoral immune response to Bartonella henselae infection by protein microarray.

Authors:  Adam Vigil; Rocio Ortega; Aarti Jain; Rie Nakajima-Sasaki; Xiaolin Tan; Bruno B Chomel; Rickie W Kasten; Jane E Koehler; Philip L Felgner
Journal:  PLoS One       Date:  2010-07-06       Impact factor: 3.240

3.  Analysis of clonal type-specific antibody reactions in Toxoplasma gondii seropositive humans from Germany by peptide-microarray.

Authors:  Pavlo Maksimov; Johannes Zerweck; Aline Maksimov; Andrea Hotop; Uwe Gross; Katrin Spekker; Walter Däubener; Sandra Werdermann; Olaf Niederstrasser; Eckhardt Petri; Marc Mertens; Rainer G Ulrich; Franz J Conraths; Gereon Schares
Journal:  PLoS One       Date:  2012-03-28       Impact factor: 3.240

4.  rapmad: Robust analysis of peptide microarray data.

Authors:  Bernhard Y Renard; Martin Löwer; Yvonne Kühne; Ulf Reimer; Andrée Rothermel; Ozlem Türeci; John C Castle; Ugur Sahin
Journal:  BMC Bioinformatics       Date:  2011-08-04       Impact factor: 3.169

5.  Identification of Cytauxzoon felis antigens via protein microarray and assessment of expression library immunization against cytauxzoonosis.

Authors:  Megan E Schreeg; Henry S Marr; Jaime L Tarigo; Meredith K Sherrill; Hilton K Outi; Elizabeth H Scholl; David M Bird; Adam Vigil; Chris Hung; Rie Nakajima; Li Liang; Angela Trieu; Denise L Doolan; Jennifer E Thomas; Michael G Levy; Mason V Reichard; Philip L Felgner; Leah A Cohn; Adam J Birkenheuer
Journal:  Clin Proteomics       Date:  2018-12-29       Impact factor: 3.988

6.  Serotyping of Toxoplasma gondii in cats (Felis domesticus) reveals predominance of type II infections in Germany.

Authors:  Pavlo Maksimov; Johannes Zerweck; Jitender P Dubey; Nikola Pantchev; Caroline F Frey; Aline Maksimov; Ulf Reimer; Mike Schutkowski; Morteza Hosseininejad; Mario Ziller; Franz J Conraths; Gereon Schares
Journal:  PLoS One       Date:  2013-11-07       Impact factor: 3.240
  6 in total

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