Literature DB >> 19648380

Improved detection of F-specific RNA coliphages in fecal material by extraction and polyethylene glycol precipitation.

Tineke H Jones1, Michael W Johns.   

Abstract

Male-specific RNA coliphages (F-RNA coliphages) have been proposed as a potential viral indicator of fecal contamination in water and foods because they are easy to culture and are a normal component of the mammalian gut flora. F-RNA coliphage plaque numbers are typically obtained by directly plating a 10-fold dilution of 1 g of fecal material, but the numbers of F-RNA coliphages shed by animals and humans may be too low for direct enumeration. Therefore, the sensitivity of detecting F-RNA coliphages in fecal material was improved by extracting and precipitating F-RNA coliphage from a 10-g fecal sample by use of polyethylene glycol (PEG). The highest recovery of F-RNA coliphage with 10% beef extract, pH 7.2, was obtained in the presence of 1 M NaCl and 10% PEG after 16 h of precipitation, but a pellet was not obtained after a short precipitation time of 2 h. There was no significant difference between eluant-to-fecal-material ratios of 4:1 and 9:1 or homogenization with a stomacher or pulsifier. F-RNA coliphage were detected in 64% (16 of 25 samples) of fecal samples from various sources when the sample size was 10 g but in 36% (9 of 25 samples) of samples when the sample size was 1 g. When F-RNA coliphage were detected in 1-g samples, they were also detected in 10-g samples. When F-RNA coliphage were detected in 10-g samples but not in 1-g samples, the levels were <100 PFU/g.

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Year:  2009        PMID: 19648380      PMCID: PMC2753055          DOI: 10.1128/AEM.00436-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  22 in total

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2.  Enteric bacteriophages as potential fecal indicators in ground beef and poultry meat.

Authors:  F C Hsu; Y S Carol Shieh; M D Sobsey
Journal:  J Food Prot       Date:  2002-01       Impact factor: 2.077

3.  Comparison of membrane filtration rates and hydrophobic grid membrane filter coliform and Escherichia coli counts in food suspensions using paddle-type and pulsifier sample preparation procedures.

Authors:  A N Sharpe; E M Hearn; J Kovacs-Nolan
Journal:  J Food Prot       Date:  2000-01       Impact factor: 2.077

4.  Concentration and purification of beef extract mock eluates from water samples for the detection of enteroviruses, hepatitis A virus, and Norwalk virus by reverse transcription-PCR.

Authors:  K J Schwab; R De Leon; M D Sobsey
Journal:  Appl Environ Microbiol       Date:  1995-02       Impact factor: 4.792

5.  Detection of enteric viruses in oysters by using the polymerase chain reaction.

Authors:  R L Atmar; T G Metcalf; F H Neill; M K Estes
Journal:  Appl Environ Microbiol       Date:  1993-02       Impact factor: 4.792

6.  F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin.

Authors:  A H Havelaar; W M Pot-Hogeboom; K Furuse; R Pot; M P Hormann
Journal:  J Appl Bacteriol       Date:  1990-07

7.  Survival of poliovirus within organic solids during chlorination.

Authors:  T W Hejkal; F M Wellings; P A LaRock; A L Lewis
Journal:  Appl Environ Microbiol       Date:  1979-07       Impact factor: 4.792

8.  Bacteriophages and indicator bacteria in human and animal faeces.

Authors:  A H Havelaar; K Furuse; W M Hogeboom
Journal:  J Appl Bacteriol       Date:  1986-03

9.  Ultrafiltration-based techniques for rapid and simultaneous concentration of multiple microbe classes from 100-L tap water samples.

Authors:  Amy L Polaczyk; Jothikumar Narayanan; Theresa L Cromeans; Donghyun Hahn; Jacqueline M Roberts; James E Amburgey; Vincent R Hill
Journal:  J Microbiol Methods       Date:  2008-02-29       Impact factor: 2.363

10.  Effects of temperature and host cell growth phase on replication of F-specific RNA coliphage Q beta.

Authors:  M A Woody; D O Cliver
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

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Authors:  Tineke H Jones; Julie Brassard; Edward Topp; Graham Wilkes; David R Lapen
Journal:  Appl Environ Microbiol       Date:  2017-01-17       Impact factor: 4.792

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4.  The detectability and removal efficiency of SARS-CoV-2 in a large-scale septic tank of a COVID-19 quarantine facility in Japan.

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Journal:  Sci Total Environ       Date:  2022-08-06       Impact factor: 10.753

5.  A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach.

Authors:  Camille d'Humières; Marie Touchon; Sara Dion; Jean Cury; Amine Ghozlane; Marc Garcia-Garcera; Christiane Bouchier; Laurence Ma; Erick Denamur; Eduardo P C Rocha
Journal:  Sci Rep       Date:  2019-08-05       Impact factor: 4.379

6.  Detection of SARS-CoV-2 in wastewater in Japan during a COVID-19 outbreak.

Authors:  Akihiko Hata; Hiroe Hara-Yamamura; Yuno Meuchi; Shota Imai; Ryo Honda
Journal:  Sci Total Environ       Date:  2020-11-10       Impact factor: 7.963

7.  Surveillance of SARS-CoV-2 in Sewage Treatment Plants between January 2020 and July 2021 in Taiwan.

Authors:  Wei-Lun Huang; Wen-Bin Fann; Rong-Jun Shen; Yi Chu; Jyh-Yuan Yang
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  7 in total

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