Literature DB >> 19646535

Bayesian spatiotemporal model of fMRI data.

Alicia Quirós1, Raquel Montes Diez, Dani Gamerman.   

Abstract

This research describes a new Bayesian spatiotemporal model to analyse block-design BOLD fMRI studies. In the temporal dimension, we parameterise the hemodynamic response function's (HRF) shape with a potential increase of signal and a subsequent exponential decay. In the spatial dimension, we use Gaussian Markov random fields (GMRF) priors on activation characteristics parameters (location and magnitude) that embody our prior knowledge that evoked responses are spatially contiguous and locally homogeneous. The result is a spatiotemporal model with a small number of parameters, all of them interpretable. Simulations from the model are performed in order to ascertain the performance of the sampling scheme and the ability of the posterior to estimate model parameters, as well as to check the model sensitivity to signal to noise ratio. Results are shown on synthetic data and on real data from a block-design fMRI experiment.

Mesh:

Year:  2009        PMID: 19646535     DOI: 10.1016/j.neuroimage.2009.07.047

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  7 in total

1.  Spatio-temporal analysis of brain MRI images using hidden Markov models.

Authors:  Ying Wang; Susan M Resnick; Christos Davatzikos
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

2.  A spatio-temporal nonparametric Bayesian variable selection model of fMRI data for clustering correlated time courses.

Authors:  Linlin Zhang; Michele Guindani; Francesco Versace; Marina Vannucci
Journal:  Neuroimage       Date:  2014-03-18       Impact factor: 6.556

3.  A Bayesian Approach for Estimating Dynamic Functional Network Connectivity in fMRI Data.

Authors:  Ryan Warnick; Michele Guindani; Erik Erhardt; Elena Allen; Vince Calhoun; Marina Vannucci
Journal:  J Am Stat Assoc       Date:  2018-05-16       Impact factor: 5.033

4.  Bayesian Models for fMRI Data Analysis.

Authors:  Linlin Zhang; Michele Guindani; Marina Vannucci
Journal:  Wiley Interdiscip Rev Comput Stat       Date:  2015 Jan-Feb

5.  A Bayesian framework for simultaneously modeling neural and behavioral data.

Authors:  Brandon M Turner; Birte U Forstmann; Eric-Jan Wagenmakers; Scott D Brown; Per B Sederberg; Mark Steyvers
Journal:  Neuroimage       Date:  2013-01-28       Impact factor: 6.556

Review 6.  Spatial and spatio-temporal statistical analyses of retinal images: a review of methods and applications.

Authors:  Wenyue Zhu; Ruwanthi Kolamunnage-Dona; Yalin Zheng; Simon Harding; Gabriela Czanner
Journal:  BMJ Open Ophthalmol       Date:  2020-05-28

7.  Does higher sampling rate (multiband + SENSE) improve group statistics - An example from social neuroscience block design at 3T.

Authors:  Ritu Bhandari; Evgeniya Kirilina; Matthan Caan; Judith Suttrup; Teresa De Sanctis; Lorenzo De Angelis; Christian Keysers; Valeria Gazzola
Journal:  Neuroimage       Date:  2020-03-12       Impact factor: 6.556

  7 in total

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