Literature DB >> 19643889

Rhizobium tibeticum sp. nov., a symbiotic bacterium isolated from Trigonella archiducis-nicolai (Sirj.) Vassilcz.

Bao Chao Hou1, En Tao Wang, Ying Li, Rui Zong Jia, Wen Feng Chen, Yu Gao, Ren Jie Dong, Wen Xin Chen.   

Abstract

Isolated from root nodules of Trigonella archiducis-nicolai (Sirj.) Vassilcz. grown in Tibet, China, cells of the bacterial strains CCBAU 85039(T) and CCBAU 85027 were Gram-negative, aerobic, motile, non-spore-forming rods that formed colonies that were semi-translucent and opalescent on yeast extract-mannitol agar. In numerical taxonomy, SDS-PAGE analysis of whole-cell proteins and DNA-DNA hybridization, the two strains were very similar and were different from reference strains of defined Rhizobium species. In the phylogeny based on 16S rRNA gene sequences, they were most similar to Rhizobium etli CFN 42(T) (98.2 % similarity) and R. leguminosarum USDA 2370(T) (97.6 %). Sequence analyses of the housekeeping genes recA, atpD and glnII and the 16S-23S rRNA intergenic spacer, phenotypic characteristics and cellular fatty acid profiles strongly suggested that these two strains represented a novel species within Rhizobium. Cross-nodulation tests and sequencing of nifH and nodA genes showed that these two strains were symbiotic bacteria that nodulated Trigonella archiducis-nicolai, Medicago lupulina, Medicago sativa, Melilotus officinalis, Phaseolus vulgaris and Trigonella foenum-graecum. Based on the results, the novel species Rhizobium tibeticum sp. nov. is described to accommodate the two strains. The type strain is CCBAU 85039(T) (=LMG 24453(T) =CGMCC 1.7071(T)). The DNA G+C content of this strain is 59.7 mol% (T(m)).

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Year:  2009        PMID: 19643889     DOI: 10.1099/ijs.0.009647-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Genome sequence of Rhizobium grahamii CCGE502, a broad-host-range symbiont with low nodulation competitiveness in Phaseolus vulgaris.

Authors:  M Julia Althabegoiti; Luis Lozano; Gonzalo Torres-Tejerizo; Ernesto Ormeño-Orrillo; Marco A Rogel; Víctor González; Esperanza Martínez-Romero
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

2.  Genetic diversity of rhizobia isolated from nodules of Trigonella foenum-graecum L. (fenugreek) cultivated in Northwestern Morocco.

Authors:  Najlae Belkadi; Fatima Ezzakkioui; Imane Saibari; Rajaa Chahboune; Abderrazak Rfaki; Barrijal Said
Journal:  Arch Microbiol       Date:  2022-08-25       Impact factor: 2.667

3.  MALDI-TOF mass spectrometry is a fast and reliable platform for identification and ecological studies of species from family Rhizobiaceae.

Authors:  Laura Ferreira; Fernando Sánchez-Juanes; Paula García-Fraile; Raúl Rivas; Pedro F Mateos; Eustoquio Martínez-Molina; José Manuel González-Buitrago; Encarna Velázquez
Journal:  PLoS One       Date:  2011-05-31       Impact factor: 3.240

4.  Characterization of Rhizobium grahamii extrachromosomal replicons and their transfer among rhizobia.

Authors:  María Julia Althabegoiti; Ernesto Ormeño-Orrillo; Luis Lozano; Gonzalo Torres Tejerizo; Marco Antonio Rogel; Jaime Mora; Esperanza Martínez-Romero
Journal:  BMC Microbiol       Date:  2014-01-08       Impact factor: 3.605

5.  Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T.

Authors:  Gonzalo Torres Tejerizo; Daniel Wibberg; Anika Winkler; Ernesto Ormeño-Orrillo; Esperanza Martínez-Romero; Karsten Niehaus; Alfred Pühler; Jörn Kalinowski; Antonio Lagares; Andreas Schlüter; Mariano Pistorio
Journal:  Genome Announc       Date:  2017-01-26

6.  Genetic characterization at the species and symbiovar level of indigenous rhizobial isolates nodulating Phaseolus vulgaris in Greece.

Authors:  Evdoxia Efstathiadou; Georgia Ntatsi; Dimitrios Savvas; Anastasia P Tampakaki
Journal:  Sci Rep       Date:  2021-04-21       Impact factor: 4.379

7.  The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host.

Authors:  Bertrand Eardly; Wan Adnawani Meor Osman; Julie Ardley; Jaco Zandberg; Margaret Gollagher; Peter van Berkum; Patrick Elia; Dora Marinova; Rekha Seshadri; T B K Reddy; Natalia Ivanova; Amrita Pati; Tanja Woyke; Nikos Kyrpides; Matthys Loedolff; Damian W Laird; Wayne Reeve
Journal:  Front Microbiol       Date:  2022-04-13       Impact factor: 6.064

  7 in total

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