Literature DB >> 19641524

Gene knockdown studies revealed CCDC50 as a candidate gene in mantle cell lymphoma and chronic lymphocytic leukemia.

A Farfsing1, F Engel, M Seiffert, E Hartmann, G Ott, A Rosenwald, S Stilgenbauer, H Döhner, M Boutros, P Lichter, A Pscherer.   

Abstract

The two B-cell non-Hodgkin's lymphoma entities, chronic lymphocytic leukemia (CLL) and mantle cell lymphoma (MCL), show recurrent chromosomal gains of 3q25-q29, 12q13-q14 and 18q21-q22. The pathomechanisms affected by these aberrations are not understood. The aim of this study was to identify genes, located within these gained regions, which control cell death and cell survival of MCL and CLL cancer cells. Blood samples collected from 18 patients with CLL and 6 patients with MCL, as well as 6 cell lines representing both malignancies were analyzed by gene expression profiling. By a comparison of genomic DNA and gene expression, 72 candidate genes were identified. We performed a limited RNA interference screening with these candidates to identify genes affecting cell survival. CCDC50 (coiled coil domain containing protein 50), SERPINI2 and SMARCC2 mediated a reduction of cell viability in primary CLL cells as well as in cell lines. Gene knockdown and a nuclear factor kappa B (NFkappaB) reporter gene assay revealed that CCDC50 is required for survival in MCL and CLL cells and controls NFkappaB signaling.

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Year:  2009        PMID: 19641524     DOI: 10.1038/leu.2009.144

Source DB:  PubMed          Journal:  Leukemia        ISSN: 0887-6924            Impact factor:   11.528


  14 in total

1.  ZRANB2 localizes to supraspliceosomes and influences the alternative splicing of multiple genes in the transcriptome.

Authors:  Yee Hwa J Yang; M Andrea Markus; A Helena Mangs; Oleg Raitskin; Ruth Sperling; Brian J Morris
Journal:  Mol Biol Rep       Date:  2013-05-11       Impact factor: 2.316

2.  Genome-wide scan on total serum IgE levels identifies no common variants in a healthy Chinese male population.

Authors:  Ming Liao; Dianchun Shi; Yao Wang; Kai Zhang; Xin Chen; Yong Gao; Aihua Tan; Qiang Xuan; Xiaobo Yang; Yanlin Hu; Xue Qin; Haiying Zhang; Zengnan Mo
Journal:  Immunogenetics       Date:  2013-05-10       Impact factor: 2.846

3.  Defective DROSHA processing contributes to downregulation of MiR-15/-16 in chronic lymphocytic leukemia.

Authors:  D Allegra; V Bilan; A Garding; H Döhner; S Stilgenbauer; F Kuchenbauer; D Mertens; M Zucknick
Journal:  Leukemia       Date:  2013-08-26       Impact factor: 11.528

4.  A novel selective autophagy receptor, CCDC50, delivers K63 polyubiquitination-activated RIG-I/MDA5 for degradation during viral infection.

Authors:  Panpan Hou; Kongxiang Yang; Penghui Jia; Lan Liu; Yuxin Lin; Zibo Li; Jun Li; Shuliang Chen; Shuting Guo; Ji'An Pan; Junyu Wu; Hong Peng; Weijie Zeng; Chunmei Li; Yingfang Liu; Deyin Guo
Journal:  Cell Res       Date:  2020-07-01       Impact factor: 25.617

Review 5.  Coiled-Coil Domain-Containing (CCDC) Proteins: Functional Roles in General and Male Reproductive Physiology.

Authors:  Patra Priyadarshini Priyanka; Suresh Yenugu
Journal:  Reprod Sci       Date:  2021-05-03       Impact factor: 3.060

6.  Super-SILAC allows classification of diffuse large B-cell lymphoma subtypes by their protein expression profiles.

Authors:  Sally J Deeb; Rochelle C J D'Souza; Jürgen Cox; Marc Schmidt-Supprian; Matthias Mann
Journal:  Mol Cell Proteomics       Date:  2012-03-21       Impact factor: 5.911

7.  Identification of subtype specific miRNA-mRNA functional regulatory modules in matched miRNA-mRNA expression data: multiple myeloma as a case.

Authors:  Yunpeng Zhang; Wei Liu; Yanjun Xu; Chunquan Li; Yingying Wang; Haixiu Yang; Chunlong Zhang; Fei Su; Yixue Li; Xia Li
Journal:  Biomed Res Int       Date:  2015-03-19       Impact factor: 3.411

8.  Generation of BAC transgenic tadpoles enabling live imaging of motoneurons by using the urotensin II-related peptide (ust2b) gene as a driver.

Authors:  Marion Bougerol; Frédéric Auradé; François M Lambert; Didier Le Ray; Denis Combes; Muriel Thoby-Brisson; Frédéric Relaix; Nicolas Pollet; Hervé Tostivint
Journal:  PLoS One       Date:  2015-02-06       Impact factor: 3.240

9.  Coiled-coil domain containing 109B is a HIF1α-regulated gene critical for progression of human gliomas.

Authors:  Ran Xu; Mingzhi Han; Yangyang Xu; Xin Zhang; Chao Zhang; Di Zhang; Jianxiong Ji; Yuzhen Wei; Shuai Wang; Bin Huang; Anjing Chen; Qing Zhang; Wenjie Li; Tao Sun; Feng Wang; Xingang Li; Jian Wang
Journal:  J Transl Med       Date:  2017-07-28       Impact factor: 5.531

10.  HnRNP A1 - mediated alternative splicing of CCDC50 contributes to cancer progression of clear cell renal cell carcinoma via ZNF395.

Authors:  Guoliang Sun; Hui Zhou; Ke Chen; Jin Zeng; Yangjun Zhang; Libin Yan; Weimin Yao; Junhui Hu; Tao Wang; Jinchun Xing; Kefeng Xiao; Lily Wu; Zhangqun Ye; Hua Xu
Journal:  J Exp Clin Cancer Res       Date:  2020-06-19
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