Literature DB >> 19639136

General and efficient simulation of pulse EPR spectra.

Stefan Stoll1, R David Britt.   

Abstract

We present a rather general and efficient method of simulating electron-spin echo spectra for spin systems where the microwave frequency does not simultaneously excite EPR transitions that share a common level. The approach can handle arbitrary pulse sequences with microwave pulses of arbitrary length and strength. The signal is computed as a sum over signals from the electron coherence transfer pathways contributing to the detected echo. For each pathway, amplitudes and frequencies of the signal components are computed and used to construct a spectral histogram from which the time-domain signal is obtained. For multinuclear spin systems, the nuclear subspace is factorized to accelerate the computation. The method is also applicable to high electron spin systems with significant zero-field splitting and to pulse electron-nuclear double resonance experiments. The method is implemented in the software package EasySpin, and several illustrative calculations are shown.

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Year:  2009        PMID: 19639136     DOI: 10.1039/b907277b

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  35 in total

1.  Comparison of two yeast MnSODs: mitochondrial Saccharomyces cerevisiae versus cytosolic Candida albicans.

Authors:  Yuewei Sheng; Troy A Stich; Kevin Barnese; Edith B Gralla; Duilio Cascio; R David Britt; Diane E Cabelli; Joan Selverstone Valentine
Journal:  J Am Chem Soc       Date:  2011-11-30       Impact factor: 15.419

2.  Electron Paramagnetic Resonance Spectroscopic Identification of the Fe-S Clusters in the SPASM Domain-Containing Radical SAM Enzyme PqqE.

Authors:  Lizhi Tao; Wen Zhu; Judith P Klinman; R David Britt
Journal:  Biochemistry       Date:  2019-12-11       Impact factor: 3.162

3.  Substantial contribution of the two imidazole rings of the His13-His14 dyad to Cu(II) binding in amyloid-β(1-16) at physiological pH and its significance.

Authors:  Byong-kyu Shin; Sunil Saxena
Journal:  J Phys Chem A       Date:  2011-04-14       Impact factor: 2.781

4.  Both N-Terminal and C-Terminal Histidine Residues of the Prion Protein Are Essential for Copper Coordination and Neuroprotective Self-Regulation.

Authors:  Kevin M Schilling; Lizhi Tao; Bei Wu; Joseph T M Kiblen; Natalia C Ubilla-Rodriguez; M Jake Pushie; R David Britt; Graham P Roseman; David A Harris; Glenn L Millhauser
Journal:  J Mol Biol       Date:  2020-05-28       Impact factor: 5.469

5.  Probing the structure of membrane proteins with electron spin echo envelope modulation spectroscopy.

Authors:  Daniel Mayo; Andy Zhou; Indra Sahu; Robert McCarrick; Parker Walton; Adam Ring; Kaylee Troxel; Aaron Coey; Jaclyn Hawn; Abdul-Hamid Emwas; Gary A Lorigan
Journal:  Protein Sci       Date:  2011-06-02       Impact factor: 6.725

6.  The world as viewed by and with unpaired electrons.

Authors:  Sandra S Eaton; Gareth R Eaton
Journal:  J Magn Reson       Date:  2012-08-15       Impact factor: 2.229

7.  The tetrahydrobiopterin radical interacting with high- and low-spin heme in neuronal nitric oxide synthase - A new indicator of the extent of NOS coupling.

Authors:  Matthew D Krzyaniak; Alex A Cruce; Preethi Vennam; Molly Lockart; Vladimir Berka; Ah-Lim Tsai; Michael K Bowman
Journal:  Free Radic Biol Med       Date:  2016-10-29       Impact factor: 7.376

8.  Actinide covalency measured by pulsed electron paramagnetic resonance spectroscopy.

Authors:  Alasdair Formanuik; Ana-Maria Ariciu; Fabrizio Ortu; Reece Beekmeyer; Andrew Kerridge; Floriana Tuna; Eric J L McInnes; David P Mills
Journal:  Nat Chem       Date:  2016-12-26       Impact factor: 24.427

9.  Multifrequency EPR studies of manganese catalases provide a complete description of proteinaceous nitrogen coordination.

Authors:  Troy A Stich; James W Whittaker; R David Britt
Journal:  J Phys Chem B       Date:  2010-01-07       Impact factor: 2.991

10.  Inhibition of the 4Fe-4S Proteins IspG and IspH: an EPR, ENDOR and HYSCORE Investigation.

Authors:  Francisco Guerra; Ke Wang; Jikun Li; Weixue Wang; Yi-Liang Liu; Shivani Amin; Eric Oldfield
Journal:  Chem Sci       Date:  2014-04-01       Impact factor: 9.825

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