Literature DB >> 19634860

Recipe for uncovering the bioactive components in herbal medicine.

Foo-Tim Chau1, Hoi-Yan Chan, Chui-Yee Cheung, Cheng-Jian Xu, Yizeng Liang, Olav M Kvalheim.   

Abstract

Using whole chromatographic profiles and measurements of total bioactivity as input, a quantitative pattern-activity relationship (QPAR) approach is proposed as a general method for providing two pieces of crucial information about complex bioactive mixtures available: (i) a model for predicting total bioactivity from the chromatographic fingerprint and (ii) the features in the chromatographic profile responsible for the bioactivity. While the first piece of information is already available through existing approaches, the second one results from our ability to remove dominant features in the chromatographic fingerprints which mask the components specifically related to pharmacological activity. Our targeted approach makes information about bioactivity available at the molecular level and provides possibilities for assessment of herbal medicine (HM) possible beyond just authentication and total bioactivity. As an example, the antioxidant property of the HM Radix Puerariae lobatae is measured through its reducing power toward a ferric ion complex. A partial least-squares (PLS) model is created to predict the antioxidant activity from the chromatographic fingerprint. Using the antioxidant activity as a target, the most discriminatory projection in the multivariate space spanned by the chromatographic profiles is revealed. From this target-projected component, the chromatographic regions most strongly connected to antioxidant activity are identified using the so-called selectivity ratio (SR) plot. The results are validated by prediction of samples not included in the modeling step.

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Year:  2009        PMID: 19634860     DOI: 10.1021/ac900731z

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  12 in total

1.  Opportunities and Limitations for Untargeted Mass Spectrometry Metabolomics to Identify Biologically Active Constituents in Complex Natural Product Mixtures.

Authors:  Lindsay K Caesar; Joshua J Kellogg; Olav M Kvalheim; Nadja B Cech
Journal:  J Nat Prod       Date:  2019-03-07       Impact factor: 4.050

2.  An innovative herbal product for the prevention of osteoporosis.

Authors:  Ping-chung Leung; King-fai Cheng; Yat-heung Chan
Journal:  Chin J Integr Med       Date:  2011-11-19       Impact factor: 1.978

3.  Hierarchical cluster analysis of technical replicates to identify interferents in untargeted mass spectrometry metabolomics.

Authors:  Lindsay K Caesar; Olav M Kvalheim; Nadja B Cech
Journal:  Anal Chim Acta       Date:  2018-03-19       Impact factor: 6.558

4.  Biochemometrics for Natural Products Research: Comparison of Data Analysis Approaches and Application to Identification of Bioactive Compounds.

Authors:  Joshua J Kellogg; Daniel A Todd; Joseph M Egan; Huzefa A Raja; Nicholas H Oberlies; Olav M Kvalheim; Nadja B Cech
Journal:  J Nat Prod       Date:  2016-02-03       Impact factor: 4.050

5.  Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship.

Authors:  Michelle Chun-Har Ng; Tsui-Yan Lau; Kei Fan; Qing-Song Xu; Josiah Poon; Simon K Poon; Mary K Lam; Foo-Tim Chau; Daniel Man-Yuen Sze
Journal:  Biomed Res Int       Date:  2017-02-28       Impact factor: 3.411

6.  Rapid Screening of Active Components with an Osteoclastic Inhibitory Effect in Herba epimedii Using Quantitative Pattern-Activity Relationships Based on Joint-Action Models.

Authors:  Xiao-Yan Yuan; Meng Wang; Sheng Lei; Qian-Xu Yang; Yan-Qiu Liu
Journal:  Molecules       Date:  2017-10-19       Impact factor: 4.411

7.  Lessons learnt from evidence-based approach of using chinese herbal medicines in liver cancer.

Authors:  Zhan Zheng; William Chi-Shing Cho; Ling Xu; Juyong Wang; Daniel Man-Yuen Sze
Journal:  Evid Based Complement Alternat Med       Date:  2013-05-29       Impact factor: 2.629

8.  Rapid Discrimination for Traditional Complex Herbal Medicines from Different Parts, Collection Time, and Origins Using High-Performance Liquid Chromatography and Near-Infrared Spectral Fingerprints with Aid of Pattern Recognition Methods.

Authors:  Haiyan Fu; Yao Fan; Xu Zhang; Hanyue Lan; Tianming Yang; Mei Shao; Sihan Li
Journal:  J Anal Methods Chem       Date:  2015-08-09       Impact factor: 2.193

9.  Ensemble learning for prediction of the bioactivity capacity of herbal medicines from chromatographic fingerprints.

Authors:  Hao Chen; Josiah Poon; Simon K Poon; Lizhi Cui; Kei Fan; Daniel Sze
Journal:  BMC Bioinformatics       Date:  2015-08-25       Impact factor: 3.169

10.  UPLC-QTOF/MSE and Bioassay Are Available Approaches for Identifying Quality Fluctuation of Xueshuantong Lyophilized Powder in Clinic.

Authors:  Zhi-Rui Yang; Zi-Hao Wang; Jin-Fa Tang; Yan Yan; Shi-Jun Yue; Wu-Wen Feng; Zheng-Yuan Shi; Xin-Tong Meng; Cheng Peng; Chang-Yun Wang; Da-Li Meng; Dan Yan
Journal:  Front Pharmacol       Date:  2018-06-15       Impact factor: 5.810

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