Literature DB >> 19631711

Enzymatic characterization of a monomeric isocitrate dehydrogenase from Streptomyces lividans TK54.

Beibei Zhang1, Baojuan Wang, Peng Wang, Zhengyu Cao, Enqi Huang, Jiasheng Hao, Antony M Dean, Guoping Zhu.   

Abstract

Isocitrate dehydrogenase (IDH) is one of the key enzymes in the citric acid cycle, which involves in providing energy and biosynthetic precursors for metabolism. Here, we report for the first time the enzymatic characterization of a monomeric NADP(+)-dependent IDH from Streptomyces lividans TK54 (SlIDH). The icd gene (GenBank database accession number EU661252) encoding IDH was cloned and overexpressed in Escherichia coli. The molecular mass of SlIDH was about 80 kDa, typical of a monomeric NADP-IDH, and showed high amino acid sequence identity with known monomeric IDHs. The optimal activity of the 6His-tagged SlIDH was found at pH values 8.5 (Mn(2+)) and 9.0 (Mg(2+)), and the optimal temperature was around 46 degrees C. Heat-inactivation studies showed that about 50% SlIDH activity was preserved at 38 degrees C after 20 min of incubation. The recombinant SlIDH displayed a 62,000-fold (k(cat)/K(m)) preference for NADP(+) over NAD(+) with Mn(2+), and a 85,000-fold greater specificity for NADP(+) than NAD(+) with Mg(2+). Therefore, SlIDH is a divalent cation-dependent monomeric IDH with remarkably high coenzyme preference for NADP(+).

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Year:  2009        PMID: 19631711     DOI: 10.1016/j.biochi.2009.07.011

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  9 in total

1.  Biochemical and phylogenetic characterization of a monomeric isocitrate dehydrogenase from a marine methanogenic archaeon Methanococcoides methylutens.

Authors:  Peng Wang; Yuan Wang; Xiuxiu Guo; Shiping Huang; Guoping Zhu
Journal:  Extremophiles       Date:  2020-01-22       Impact factor: 2.395

2.  Heteroexpression and characterization of a monomeric isocitrate dehydrogenase from the multicellular prokaryote Streptomyces avermitilis MA-4680.

Authors:  Ao Wang; Zheng-Yu Cao; Peng Wang; Ai-Min Liu; Wei Pan; Jie Wang; Guo-Ping Zhu
Journal:  Mol Biol Rep       Date:  2010-11-20       Impact factor: 2.316

3.  From a dimer to a monomer: Construction of a chimeric monomeric isocitrate dehydrogenase.

Authors:  Changqing Tian; Bin Wen; Mingjie Bian; Mingming Jin; Peng Wang; Lei Xu; Guoping Zhu
Journal:  Protein Sci       Date:  2021-10-23       Impact factor: 6.725

4.  Expression and characterization of a novel isocitrate dehydrogenase from Streptomyces diastaticus No. 7 strain M1033.

Authors:  Bei-Bei Zhang; Peng Wang; Ao Wang; Wen-Cai Wang; Wang-Gang Tang; Guo-Ping Zhu
Journal:  Mol Biol Rep       Date:  2012-10-17       Impact factor: 2.316

5.  Novel type II and monomeric NAD+ specific isocitrate dehydrogenases: phylogenetic affinity, enzymatic characterization, and evolutionary implication.

Authors:  Peng Wang; Changqi Lv; Guoping Zhu
Journal:  Sci Rep       Date:  2015-03-16       Impact factor: 4.379

6.  A Novel Type II NAD+-Specific Isocitrate Dehydrogenase from the Marine Bacterium Congregibacter litoralis KT71.

Authors:  Ming-Cai Wu; Chang-Qing Tian; Hong-Mei Cheng; Lei Xu; Peng Wang; Guo-Ping Zhu
Journal:  PLoS One       Date:  2015-05-05       Impact factor: 3.240

7.  Biochemical and Phylogenetic Characterization of a Novel NADP+-Specific Isocitrate Dehydrogenase From the Marine Microalga Phaeodactylum tricornutum.

Authors:  Shiping Huang; Jiaxin Zhao; Wenjing Li; Peng Wang; Zhenglian Xue; Guoping Zhu
Journal:  Front Mol Biosci       Date:  2021-07-05

8.  Isocitrate dehydrogenase from Streptococcus mutans: biochemical properties and evaluation of a putative phosphorylation site at Ser102.

Authors:  Peng Wang; Ping Song; Mingming Jin; Guoping Zhu
Journal:  PLoS One       Date:  2013-03-06       Impact factor: 3.240

9.  Crystal Structure of the Isocitrate Dehydrogenase 2 from Acinetobacter baumannii (AbIDH2) Reveals a Novel Dimeric Structure with Two Monomeric-IDH-Like Subunits.

Authors:  Peng Wang; Yatao Wu; Jie Liu; Ping Song; Shan Li; Xinxin Zhou; Guoping Zhu
Journal:  Int J Mol Sci       Date:  2018-04-10       Impact factor: 5.923

  9 in total

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