Literature DB >> 19622754

Atomic structures of two novel immunoglobulin-like domain pairs in the actin cross-linking protein filamin.

Outi K Heikkinen1, Salla Ruskamo, Peter V Konarev, Dmitri I Svergun, Tatu Iivanainen, Sami M Heikkinen, Perttu Permi, Harri Koskela, Ilkka Kilpeläinen, Jari Ylänne.   

Abstract

Filamins are actin filament cross-linking proteins composed of an N-terminal actin-binding domain and 24 immunoglobulin-like domains (IgFLNs). Filamins interact with numerous proteins, including the cytoplasmic domains of plasma membrane signaling and cell adhesion receptors. Thereby filamins mechanically and functionally link the cell membrane to the cytoskeleton. Most of the interactions have been mapped to the C-terminal IgFLNs 16-24. Similarly, as with the previously known compact domain pair of IgFLNa20-21, the two-domain fragments IgFLNa16-17 and IgFLNa18-19 were more compact in small angle x-ray scattering analysis than would be expected for two independent domains. Solution state NMR structures revealed that the domain packing in IgFLNa18-19 resembles the structure of IgFLNa20-21. In both domain pairs the integrin-binding site is masked, although the details of the domain-domain interaction are partly distinct. The structure of IgFLNa16-17 revealed a new domain packing mode where the adhesion receptor binding site of domain 17 is not masked. Sequence comparison suggests that similar packing of three tandem filamin domain pairs is present throughout the animal kingdom, and we propose that this packing is involved in the regulation of filamin interactions through a mechanosensor mechanism.

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Year:  2009        PMID: 19622754      PMCID: PMC2757246          DOI: 10.1074/jbc.M109.019661

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  30 in total

1.  Determination of domain structure of proteins from X-ray solution scattering.

Authors:  D I Svergun; M V Petoukhov; M H Koch
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing.

Authors:  D I Svergun
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

3.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

Review 4.  The many faces of filamin: a versatile molecular scaffold for cell motility and signalling.

Authors:  Yuanyi Feng; Christopher A Walsh
Journal:  Nat Cell Biol       Date:  2004-11       Impact factor: 28.824

5.  The molecular basis of filamin binding to integrins and competition with talin.

Authors:  Tiila Kiema; Yatish Lad; Pengju Jiang; Camilla L Oxley; Massimiliano Baldassarre; Kate L Wegener; Iain D Campbell; Jari Ylänne; David A Calderwood
Journal:  Mol Cell       Date:  2006-02-03       Impact factor: 17.970

6.  Calpain 1-gamma filamin interaction in muscle cells: a possible in situ regulation by PKC-alpha.

Authors:  Fabrice Raynaud; Raynaud Fabrice; Carole Jond-Necand; Jond-Necand Carole; Anne Marcilhac; Marcilhac Anne; Dieter Fürst; Fürst Dieter; Yves Benyamin; Benyamin Yves
Journal:  Int J Biochem Cell Biol       Date:  2005-10-27       Impact factor: 5.085

7.  The structure of the GPIb-filamin A complex.

Authors:  Fumihiko Nakamura; Regina Pudas; Outi Heikkinen; Perttu Permi; Ilkka Kilpeläinen; Adam D Munday; John H Hartwig; Thomas P Stossel; Jari Ylänne
Journal:  Blood       Date:  2005-11-17       Impact factor: 22.113

8.  Disruption of the mouse mu-calpain gene reveals an essential role in platelet function.

Authors:  M Azam; S S Andrabi; K E Sahr; L Kamath; A Kuliopulos; A H Chishti
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

9.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

10.  A mutation in the dimerization domain of filamin c causes a novel type of autosomal dominant myofibrillar myopathy.

Authors:  Matthias Vorgerd; Peter F M van der Ven; Vera Bruchertseifer; Thomas Löwe; Rudolf A Kley; Rolf Schröder; Hanns Lochmüller; Mirko Himmel; Katrin Koehler; Dieter O Fürst; Angela Huebner
Journal:  Am J Hum Genet       Date:  2005-05-31       Impact factor: 11.025

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  29 in total

Review 1.  Filamins in mechanosensing and signaling.

Authors:  Ziba Razinia; Toni Mäkelä; Jari Ylänne; David A Calderwood
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

2.  MQ-HNCO-TROSY for the measurement of scalar and residual dipolar couplings in larger proteins: application to a 557-residue IgFLNa16-21.

Authors:  Sampo Mäntylahti; Outi Koskela; Pengju Jiang; Perttu Permi
Journal:  J Biomol NMR       Date:  2010-05-08       Impact factor: 2.835

3.  Phosphorylation facilitates the integrin binding of filamin under force.

Authors:  Harvey S Chen; Kevin S Kolahi; Mohammad R K Mofrad
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

4.  Differential mechanical stability of filamin A rod segments.

Authors:  Hu Chen; Xiaoying Zhu; Peiwen Cong; Michael P Sheetz; Fumihiko Nakamura; Jie Yan
Journal:  Biophys J       Date:  2011-09-07       Impact factor: 4.033

5.  Assembly of a filamin four-domain fragment and the influence of splicing variant-1 on the structure.

Authors:  Ulla Pentikäinen; Pengju Jiang; Heikki Takala; Salla Ruskamo; Iain D Campbell; Jari Ylänne
Journal:  J Biol Chem       Date:  2011-06-02       Impact factor: 5.157

Review 6.  Small-angle scattering for structural biology--expanding the frontier while avoiding the pitfalls.

Authors:  David A Jacques; Jill Trewhella
Journal:  Protein Sci       Date:  2010-04       Impact factor: 6.725

7.  A mechanism of global shape-dependent recognition and phosphorylation of filamin by protein kinase A.

Authors:  Sujay Subbayya Ithychanda; Xianyang Fang; Maradumane L Mohan; Liang Zhu; Kalyan C Tirupula; Sathyamangla V Naga Prasad; Yun-Xing Wang; Sadashiva S Karnik; Jun Qin
Journal:  J Biol Chem       Date:  2015-02-09       Impact factor: 5.157

8.  Dynamic force sensing of filamin revealed in single-molecule experiments.

Authors:  Lorenz Rognoni; Johannes Stigler; Benjamin Pelz; Jari Ylänne; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-13       Impact factor: 11.205

Review 9.  New insights into the versatile roles of platelet FlnA.

Authors:  Hervé Falet
Journal:  Platelets       Date:  2012-02-28       Impact factor: 3.862

Review 10.  Filamin structure, function and mechanics: are altered filamin-mediated force responses associated with human disease?

Authors:  Andrew J Sutherland-Smith
Journal:  Biophys Rev       Date:  2011-01-27
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