Literature DB >> 19622748

Leucyl-tRNA synthetase-dependent and -independent activation of a group I intron.

Michal T Boniecki1, Seung Bae Rho, Mikhail Tukalo, Jennifer L Hsu, Eliana P Romero, Susan A Martinis.   

Abstract

Leucyl-tRNA synthetase (LeuRS) is an essential RNA splicing factor for yeast mitochondrial introns. Intracellular experiments have suggested that it works in collaboration with a maturase that is encoded within the bI4 intron. RNA deletion mutants of the large bI4 intron were constructed to identify a competently folded intron for biochemical analysis. The minimized bI4 intron was active in RNA splicing and contrasts with previous proposals that the canonical core of the bI4 intron is deficient for catalysis. The activity of the minimized bI4 intron was enhanced in vitro by the presence of the bI4 maturase or LeuRS.

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Year:  2009        PMID: 19622748      PMCID: PMC2785312          DOI: 10.1074/jbc.M109.031179

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

Review 1.  Footprints of aminoacyl-tRNA synthetases are everywhere.

Authors:  P Schimmel; L Ribas De Pouplana
Journal:  Trends Biochem Sci       Date:  2000-05       Impact factor: 13.807

2.  The bI4 group I intron binds directly to both its protein splicing partners, a tRNA synthetase and maturase, to facilitate RNA splicing activity.

Authors:  S B Rho; S A Martinis
Journal:  RNA       Date:  2000-12       Impact factor: 4.942

3.  Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA.

Authors:  Gurminder S Bassi; Daniela M de Oliveira; Malcolm F White; Kevin M Weeks
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-02       Impact factor: 11.205

4.  Structure-function relationships of the RNA-dependent RNA polymerase from poliovirus (3Dpol). A surface of the primary oligomerization domain functions in capsid precursor processing and VPg uridylylation.

Authors:  Harsh B Pathak; Saikat Kumar B Ghosh; Allan W Roberts; Suresh D Sharma; Joshua D Yoder; Jamie J Arnold; David W Gohara; David J Barton; Aniko V Paul; Craig E Cameron
Journal:  J Biol Chem       Date:  2002-06-19       Impact factor: 5.157

5.  Interaction of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase (CYT-18 protein) with the group I intron P4-P6 domain. Thermodynamic analysis and the role of metal ions.

Authors:  M G Caprara; C A Myers; A M Lambowitz
Journal:  J Mol Biol       Date:  2001-04-27       Impact factor: 5.469

Review 6.  Aminoacyl tRNA synthetases and their connections to disease.

Authors:  Sang Gyu Park; Paul Schimmel; Sunghoon Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-05       Impact factor: 11.205

7.  An inserted region of leucyl-tRNA synthetase plays a critical role in group I intron splicing.

Authors:  Seung Bae Rho; Tommie L Lincecum; Susan A Martinis
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

8.  Function of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase in RNA splicing. Role of the idiosyncratic N-terminal extension and different modes of interaction with different group I introns.

Authors:  G Mohr; R Rennard; A D Cherniack; J Stryker; A M Lambowitz
Journal:  J Mol Biol       Date:  2001-03-16       Impact factor: 5.469

9.  A prokaryote and human tRNA synthetase provide an essential RNA splicing function in yeast mitochondria.

Authors:  F Houman; S B Rho; J Zhang; X Shen; C C Wang; P Schimmel; S A Martinis
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

10.  Structural requirement for Mg2+ binding in the group I intron core.

Authors:  Prashanth Rangan; Sarah A Woodson
Journal:  J Mol Biol       Date:  2003-05-30       Impact factor: 5.469

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  5 in total

1.  Yeast mitochondrial leucyl-tRNA synthetase CP1 domain has functionally diverged to accommodate RNA splicing at expense of hydrolytic editing.

Authors:  Jaya Sarkar; Kiranmai Poruri; Michal T Boniecki; Katherine K McTavish; Susan A Martinis
Journal:  J Biol Chem       Date:  2012-03-01       Impact factor: 5.157

2.  Ccm1p is a 15S rRNA primary transcript processing factor as elucidated by a novel in vivo system in Saccharomyces cerevisiae.

Authors:  J Ignacio Moreno; Ineshia S Coleman; Classie L Johnson; Dominique S Green; Marta A Piva
Journal:  Curr Genet       Date:  2020-03-09       Impact factor: 3.886

Review 3.  tRNA synthetase: tRNA aminoacylation and beyond.

Authors:  Yan Ling Joy Pang; Kiranmai Poruri; Susan A Martinis
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-04-04       Impact factor: 9.957

4.  Two independent activities define Ccm1p as a moonlighting protein in Saccharomyces cerevisiae.

Authors:  J Ignacio Moreno; Babu Patlolla; Kerry R Belton; Brenita C Jenkins; Polina V Radchenkova; Marta A Piva
Journal:  Biosci Rep       Date:  2012-12       Impact factor: 3.840

Review 5.  Localization and RNA Binding of Mitochondrial Aminoacyl tRNA Synthetases.

Authors:  Shahar Garin; Ofri Levi; Bar Cohen; Adi Golani-Armon; Yoav S Arava
Journal:  Genes (Basel)       Date:  2020-10-12       Impact factor: 4.096

  5 in total

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