Literature DB >> 19621053

[Structure-functional analysis of interactions of terminal deoxynucleotidyl transferase with new non-nucleoside substrates].

E S Matyugina1, L A Alexandrova, M V Jas'ko, A V Ivanov, I A Vasil'ev, V L Lapteva, A L Khandazhinskaya, M K Kukhanova.   

Abstract

New non-nucleoside esters of phosphoric acid containing various hydrophobic groups, namely (1) N-(2-tripticencarbonyl)-4-aminobutyl; (2) 5-phenylsubstituted N-(2,4-dinitrophenyl)-4-aminobutyl; (3) N-(4-phenylbenzoyl)- and N-(4-(N-benzylamino)benzoyl)-2-aminoethyl groups, as well as (4) diphenylmethyl and fluorenyl groups were synthesized and studied as substrates of terminal deoxynucleotidyl transferase. With the exception of the two latter derivatives, all the analogues displayed substrate properties and could incorporate into the deoxyoligonucleotide 3'-end. As it was shown in biochemical experiments and by computer modeling, a linker joining the triphosphate and hydrophobic fragments of the molecule was necessary for these compounds to display substrate properties.

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Year:  2009        PMID: 19621053     DOI: 10.1134/s1068162009030091

Source DB:  PubMed          Journal:  Bioorg Khim        ISSN: 0132-3423


  1 in total

1.  Sequence Preference and Initiator Promiscuity for De Novo DNA Synthesis by Terminal Deoxynucleotidyl Transferase.

Authors:  Erika Schaudy; Jory Lietard; Mark M Somoza
Journal:  ACS Synth Biol       Date:  2021-06-22       Impact factor: 5.110

  1 in total

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