Literature DB >> 19619650

Characterization of a Plasmopara species on Ambrosia artemisiifolia, and notes on P. halstedii, based on morphology and multiple gene phylogenies.

Young-Joon Choi1, Levente Kiss, László Vajna, Hyeon-Dong Shin.   

Abstract

Common ragweed (Ambrosia artemisiifolia) is an invasive and highly allergenic plant species, on which two species, Plasmopara halstedii and Plasmopara angustiterminalis, have been recognized to cause downy mildew disease. In this study, morphological and molecular patterns of seven Plasmopara specimens collected from A. artemisiifolia in Canada, Hungary, and USA were compared with those of P. halstedii and P. angustiterminalis from Helianthus and Xanthium, respectively. Analyses of partial sequences of three genes, namely those for the large subunit (28S) of rDNA, cytochrome c oxidase subunit II (COX2), and NADH dehydrogenase subunit I (ND1) of mtDNA, were carried out to examine the phylogenetic relationships among these specimens using both Bayesian and maximum parsimony methods. All the phylogenetic analyses revealed that the downy mildew pathogens infecting A. artemisiifolia in Hungary and North America clearly represent a lineage distinct from other Plasmopara taxa investigated. The shape of sporangia and the width of trunks and branches also allowed the separation of the specimens parasitic to A. artemisiifolia from P. halstedii on Helianthus annuus and P. angustiterminalis on Xanthium strumarium. Surprisingly, the Hungarian and the Canadian specimens were more closely related to each other than to those from the USA based on COX2 and ND1 mtDNA data, although the D1/D2/D3 sequences of 28S rDNA were identical in all these Plasmopara specimens. The regional distribution of the mtDNA haplotypes seen in this study suggests a transatlantic migration has occurred and would be interesting to follow up with a more detailed sampling. To investigate the diversity within P. halstedii sensu lato, infecting different host plant species, specimens from six asteraceous genera, Ambrosia, Flaveria, Helianthus, Siegesbeckia, Solidago, and Xanthium, were also included in molecular analyses. These represented six distinct lineages according to the host plant genera. These findings might serve as a basis for a taxonomical reassessment of the P. halstedii complex and also for the delimitation of several well-defined species within this complex.

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Year:  2009        PMID: 19619650     DOI: 10.1016/j.mycres.2009.07.010

Source DB:  PubMed          Journal:  Mycol Res        ISSN: 0953-7562


  6 in total

1.  Mitochondrial phylogeny reveals intraspecific variation in Peronospora effusa, the spinach downy mildew pathogen.

Authors:  Young-Joon Choi; Marco Thines; Jae-Gu Han; Hyeon-Dong Shin
Journal:  J Microbiol       Date:  2011-12-28       Impact factor: 3.422

2.  Multi-locus tree and species tree approaches toward resolving a complex clade of downy mildews (Straminipila, Oomycota), including pathogens of beet and spinach.

Authors:  Young-Joon Choi; Steven J Klosterman; Volker Kummer; Hermann Voglmayr; Hyeon-Dong Shin; Marco Thines
Journal:  Mol Phylogenet Evol       Date:  2015-03-12       Impact factor: 4.286

3.  Which morphological characteristics are most influenced by the host matrix in downy mildews? A case study in Pseudoperonospora cubensis.

Authors:  Fabian Runge; Beninweck Ndambi; Marco Thines
Journal:  PLoS One       Date:  2012-11-15       Impact factor: 3.240

4.  Towards a universal barcode of oomycetes--a comparison of the cox1 and cox2 loci.

Authors:  Young-Joon Choi; Gordon Beakes; Sally Glockling; Julia Kruse; Bora Nam; Lisa Nigrelli; Sebastian Ploch; Hyeon-Dong Shin; Roger G Shivas; Sabine Telle; Hermann Voglmayr; Marco Thines
Journal:  Mol Ecol Resour       Date:  2015-03-24       Impact factor: 7.090

5.  Plasmopara elegantissima sp. nov. (Oomycota, Peronosporales), a Downy Mildew Species Specialized to Impatiens textori (Balsaminaceae).

Authors:  Young-Joon Choi; Marlena Görg; Hyeon-Dong Shin; Marco Thines
Journal:  Mycobiology       Date:  2020-07-13       Impact factor: 1.858

6.  Rediscovery of Seven Long-Forgotten Species of Peronospora and Plasmopara (Oomycota).

Authors:  Jae Sung Lee; Hyeon-Dong Shin; Young-Joon Choi
Journal:  Mycobiology       Date:  2020-08-12       Impact factor: 1.858

  6 in total

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