Literature DB >> 19606889

Peptide length, steric effects, and ion solvation govern zwitterion stabilization in barium-chelated di- and tripeptides.

Robert C Dunbar, Jeffrey D Steill, Nick C Polfer, Jos Oomens.   

Abstract

Infrared multiple-photon dissociation (IRMPD) spectroscopy has given infrared spectra of complexes of di- and tripeptides (AlaAla, AlaAlaAla, AlaPhe, PheAla) with singly and doubly charged metal ions (K(+), Ca(2+), Sr(2+), and Ba(2+)). The switch between charge-solvated (CS) and salt-bridged zwitterion (SB) conformations is displayed through highly diagnostic features in the mid-infrared. Systematic trends are found correlating with the length of the peptide chain (tripeptides favoring CS conformations), metal ion size (larger metals favoring SB conformations), metal ion charge (doubly charged ions favoring SB conformations), and sterically available Lewis-basic side-chain interactions with the metal ion (for example a cation-pi interaction with Ba(2+) stabilizes CS for PheAla but not for AlaPhe). The principle is that CS conformations are favored for small metal ions with high charge density and extensive microsolvation of the charge by Lewis-basic groups, especially amide carbonyls; SB conformations are favored by metal ions of high charge but low charge density, which are better stabilized by salt-bridge Coulomb interactions.

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Year:  2009        PMID: 19606889     DOI: 10.1021/jp905060n

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  7 in total

1.  Infrared multiple photon dissociation action spectroscopy and theoretical studies of triethyl phosphate complexes: effects of protonation and sodium cationization on structure.

Authors:  B S Fales; N O Fujamade; J Oomens; M T Rodgers
Journal:  J Am Soc Mass Spectrom       Date:  2011-08-06       Impact factor: 3.109

2.  Linobiflavonoid inhibits human lung adenocarcinoma A549 cells: effect on tubulin protein.

Authors:  Dongbo Zhao; Guang Yang; Qingyang Meng; Junxing Liu; Shuang Yang
Journal:  Mol Biol Rep       Date:  2013-09-23       Impact factor: 2.316

3.  IRPD spectroscopy and ensemble measurements: effects of different data acquisition and analysis methods.

Authors:  James S Prell; Jeremy T O'Brien; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-25       Impact factor: 3.109

4.  Structure of sodiated octa-glycine: IRMPD spectroscopy and molecular modeling.

Authors:  David Semrouni; O Petru Balaj; Florent Calvo; Catarina F Correia; Carine Clavaguéra; Gilles Ohanessian
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-01       Impact factor: 3.109

5.  A database of alkaline-earth-coordinated peptide cross sections: insight into general aspects of structure.

Authors:  Jonathan M Dilger; Stephen J Valentine; Matthew S Glover; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2013-03-20       Impact factor: 3.109

6.  Photocatalytic production of dihydroxyacetone from glycerol on TiO2 in acetonitrile.

Authors:  Alexander Luis Imbault; Jianyu Gong; Ramin Farnood
Journal:  RSC Adv       Date:  2020-01-30       Impact factor: 4.036

7.  Infrared multiple photon dissociation of cesium iodide clusters doped with mono-, di- and triglycine.

Authors:  Jakob Heller; Milan Ončák; Nina K Bersenkowitsch; Christian van der Linde; Martin K Beyer
Journal:  Eur J Mass Spectrom (Chichester)       Date:  2018-10-04       Impact factor: 1.067

  7 in total

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