Literature DB >> 19605488

Artificial transmembrane oncoproteins smaller than the bovine papillomavirus E5 protein redefine sequence requirements for activation of the platelet-derived growth factor beta receptor.

Kristina Talbert-Slagle1, Sara Marlatt, Francisco N Barrera, Ekta Khurana, Joanne Oates, Mark Gerstein, Donald M Engelman, Ann M Dixon, Daniel Dimaio.   

Abstract

The bovine papillomavirus E5 protein (BPV E5) is a 44-amino-acid homodimeric transmembrane protein that binds directly to the transmembrane domain of the platelet-derived growth factor (PDGF) beta receptor and induces ligand-independent receptor activation. Three specific features of BPV E5 are considered important for its ability to activate the PDGF beta receptor and transform mouse fibroblasts: a pair of C-terminal cysteines, a transmembrane glutamine, and a juxtamembrane aspartic acid. By using a new genetic technique to screen libraries expressing artificial transmembrane proteins for activators of the PDGF beta receptor, we isolated much smaller proteins, from 32 to 36 residues, that lack all three of these features yet still dimerize noncovalently, specifically activate the PDGF beta receptor via its transmembrane domain, and transform cells efficiently. The primary amino acid sequence of BPV E5 is virtually unrecognizable in some of these proteins, which share as few as seven consecutive amino acids with the viral protein. Thus, small artificial proteins that bear little resemblance to a viral oncoprotein can nevertheless productively interact with the same cellular target. We speculate that similar cellular proteins may exist but have been overlooked due to their small size and hydrophobicity.

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Year:  2009        PMID: 19605488      PMCID: PMC2748040          DOI: 10.1128/JVI.00946-09

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  46 in total

1.  Selection and characterization of small random transmembrane proteins that bind and activate the platelet-derived growth factor beta receptor.

Authors:  Lisa L Freeman-Cook; Ann M Dixon; Jennifer B Frank; Yu Xia; Lara Ely; Mark Gerstein; Donald M Engelman; Daniel DiMaio
Journal:  J Mol Biol       Date:  2004-05-14       Impact factor: 5.469

Review 2.  Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions.

Authors:  Ursula Lehnert; Yu Xia; Thomas E Royce; Chem-Sing Goh; Yang Liu; Alessandro Senes; Haiyuan Yu; Zhao Lei Zhang; Donald M Engelman; Mark Gerstein
Journal:  Q Rev Biophys       Date:  2004-05       Impact factor: 5.318

3.  Transforming signals resulting from sustained activation of the PDGFbeta receptor in mortal human fibroblasts.

Authors:  Lisa M Petti; Elizabeth C Ricciardi; Heather J Page; Kristen A Porter
Journal:  J Cell Sci       Date:  2008-03-18       Impact factor: 5.285

4.  Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching.

Authors:  P D Adams; D M Engelman; A T Brünger
Journal:  Proteins       Date:  1996-11

Review 5.  Virocrine transformation.

Authors:  D Drummond-Barbosa; D DiMaio
Journal:  Biochim Biophys Acta       Date:  1997-02-22

6.  Molecular dynamics simulation of unsaturated lipid bilayers at low hydration: parameterization and comparison with diffraction studies.

Authors:  S E Feller; D Yin; R W Pastor; A D MacKerell
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

7.  Specific interaction between the bovine papillomavirus E5 transforming protein and the beta receptor for platelet-derived growth factor in stably transformed and acutely transfected cells.

Authors:  L Petti; D DiMaio
Journal:  J Virol       Date:  1994-06       Impact factor: 5.103

8.  The transmembrane domain of the E5 oncoprotein contains functionally discrete helical faces.

Authors:  A J Adduci; R Schlegel
Journal:  J Biol Chem       Date:  1999-04-09       Impact factor: 5.157

9.  The bovine papillomavirus E5 protein requires a juxtamembrane negative charge for activation of the platelet-derived growth factor beta receptor and transformation of C127 cells.

Authors:  O Klein; D Kegler-Ebo; J Su; S Smith; D DiMaio
Journal:  J Virol       Date:  1999-04       Impact factor: 5.103

10.  Golgi alkalinization by the papillomavirus E5 oncoprotein.

Authors:  F Schapiro; J Sparkowski; A Adduci; F Suprynowicz; R Schlegel; S Grinstein
Journal:  J Cell Biol       Date:  2000-01-24       Impact factor: 10.539

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  18 in total

Review 1.  Single-spanning transmembrane domains in cell growth and cell-cell interactions: More than meets the eye?

Authors:  Pierre Hubert; Paul Sawma; Jean-Pierre Duneau; Jonathan Khao; Jérôme Hénin; Dominique Bagnard; James Sturgis
Journal:  Cell Adh Migr       Date:  2010-04-20       Impact factor: 3.405

2.  Construction and maintenance of randomized retroviral expression libraries for transmembrane protein engineering.

Authors:  Sara A Marlatt; Yong Kong; Tobin J Cammett; Gregory Korbel; James P Noonan; Daniel Dimaio
Journal:  Protein Eng Des Sel       Date:  2010-12-10       Impact factor: 1.650

3.  Biologically active LIL proteins built with minimal chemical diversity.

Authors:  Erin N Heim; Jez L Marston; Ross S Federman; Anne P B Edwards; Alexander G Karabadzhak; Lisa M Petti; Donald M Engelman; Daniel DiMaio
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-10       Impact factor: 11.205

4.  A single amino acid substitution converts a transmembrane protein activator of the platelet-derived growth factor β receptor into an inhibitor.

Authors:  Lisa M Petti; Kristina Talbert-Slagle; Megan L Hochstrasser; Daniel DiMaio
Journal:  J Biol Chem       Date:  2013-08-01       Impact factor: 5.157

5.  Compensatory mutants of the bovine papillomavirus E5 protein and the platelet-derived growth factor β receptor reveal a complex direct transmembrane interaction.

Authors:  Anne P B Edwards; Yanhua Xie; Lara Bowers; Daniel DiMaio
Journal:  J Virol       Date:  2013-08-07       Impact factor: 5.103

6.  Construction and genetic selection of small transmembrane proteins that activate the human erythropoietin receptor.

Authors:  Tobin J Cammett; Susan J Jun; Emily B Cohen; Francisco N Barrera; Donald M Engelman; Daniel Dimaio
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

7.  Residues in the hendra virus fusion protein transmembrane domain are critical for endocytic recycling.

Authors:  Andreea Popa; James R Carter; Stacy E Smith; Lance Hellman; Michael G Fried; Rebecca Ellis Dutch
Journal:  J Virol       Date:  2012-01-11       Impact factor: 5.103

8.  Screening for transmembrane association in divisome proteins using TOXGREEN, a high-throughput variant of the TOXCAT assay.

Authors:  Claire R Armstrong; Alessandro Senes
Journal:  Biochim Biophys Acta       Date:  2016-07-22

Review 9.  Viral miniproteins.

Authors:  Daniel DiMaio
Journal:  Annu Rev Microbiol       Date:  2014-04-10       Impact factor: 15.500

10.  De novo selection of oncogenes.

Authors:  Kelly M Chacón; Lisa M Petti; Elizabeth H Scheideman; Valentina Pirazzoli; Katerina Politi; Daniel DiMaio
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-16       Impact factor: 11.205

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