Literature DB >> 19603252

Development and characterization of microsatellite loci in Ixeridium dentatum (Asteraceae, Lactuceae).

Sayaka Nakagawa1, Motomi Ito.   

Abstract

We isolated and characterized seven microsatellite loci for the perennial herb Ixeridium dentatum ssp. dentatum, an apomictic triploid distributed throughout the lowland areas of East Asia. The number of alleles ranged from two to seven in 32 screened individuals of I. dentatum ssp. dentatum from Japan. The observed and expected heterozygosities were 0.000-0.950 and 0.000-0.891, respectively, calculated using genotypes of 20 individuals of I. dentatum ssp. nipponicum. One locus (msid4) deviated significantly from Hardy-Weinberg equilibrium (P = 0.0001). These microsatellites were also tested for cross-amplification in 11 other taxa of Lactuceae, including five endangered taxa. These primers should be useful genetic tools not only for Ixeridium but also for other Lactuceae taxa.

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Year:  2009        PMID: 19603252     DOI: 10.1007/s10265-009-0253-5

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  6 in total

1.  An improved technique for isolating codominant compound microsatellite markers.

Authors:  Chunlan L Lian; Md Abdul Wadud; Qifang Geng; Kenichiro Shimatani; Taizo Hogetsu
Journal:  J Plant Res       Date:  2006-04-25       Impact factor: 2.629

2.  CHLOROPLAST-DNA VARIATION AND MULTIPLE ORIGINS OF AUTOPOLYPLOIDY IN HEUCHERA MICRANTHA (SAXIFRAGACEAE).

Authors:  Douglas E Soltis; Pamela S Soltis; Bryan D Ness
Journal:  Evolution       Date:  1989-05       Impact factor: 3.694

3.  Clonal identification by microsatellite loci in sporadic flowering of a dwarf bamboo species, Sasa cernua.

Authors:  Keiko Kitamura; Takayuki Kawahara
Journal:  J Plant Res       Date:  2009-02-21       Impact factor: 2.629

4.  GENETIC CONSEQUENCES OF AUTOPOLYPLOIDY IN TOLMIEA (SAXIFRAGACEAE).

Authors:  Douglas E Soltis; Pamela S Soltis
Journal:  Evolution       Date:  1989-05       Impact factor: 3.694

5.  Genetic structure of a population sample of apomictic dandelions.

Authors:  R G M Van Der Hulst; T H M Mes; M Falque; P Stam; J C M Den Nijs; K Bachmann
Journal:  Heredity (Edinb)       Date:  2003-04       Impact factor: 3.821

6.  Using patterns of genetic structure based on microsatellite loci to test hypotheses of current hybridization, ancient hybridization and incomplete lineage sorting in Conradina (Lamiaceae).

Authors:  C E Edwards; D E Soltis; P S Soltis
Journal:  Mol Ecol       Date:  2008-12       Impact factor: 6.185

  6 in total

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