Literature DB >> 1959674

Simple techniques for the quantification of protein secondary structure by 1H NMR spectroscopy.

D S Wishart1, B D Sykes, F M Richards.   

Abstract

Previous work by Wishart et al. (in press) and others [(1989) J. Magn. Reson. 83, 441-449; (1990) J. Magn. Reson. 90, 165-176] has shown a strong tendency for protein secondary structure to be manifested in 1H NMR chemical shifts. Based on these earlier results, two techniques have been developed for the quantification of secondary structure in proteins. Both methods allow for the rapid and accurate determination of the percent content of helix, coil, and beta-strand based on the integration (or peak enumeration) of selected portions of either 1-D or 2-D 1H NMR spectra. These new and very simple procedures have been found to compare quite favorably to other well established techniques for secondary structure determination such as CD, Raman and IR spectroscopy.

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Year:  1991        PMID: 1959674     DOI: 10.1016/0014-5793(91)81155-2

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  23 in total

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2.  An empirical correlation between secondary structure content and averaged chemical shifts in proteins.

Authors:  Anaika B Sibley; Monique Cosman; V V Krishnan
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

3.  Conformational distributions of denatured and unstructured proteins are similar to those of 20 × 20 blocked dipeptides.

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Journal:  J Biomol NMR       Date:  2012-03-18       Impact factor: 2.835

4.  An evaluation of chemical shift index-based secondary structure determination in proteins: influence of random coil chemical shifts.

Authors:  S P Mielke; V V Krishnan
Journal:  J Biomol NMR       Date:  2004-10       Impact factor: 2.835

5.  Solution structure of the carbon storage regulator protein CsrA from Escherichia coli.

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6.  A hydrophobic patch in the competence-stimulating Peptide, a pneumococcal competence pheromone, is essential for specificity and biological activity.

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Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

7.  A spectroscopic study of the mitochondrial transit peptide of rat malate dehydrogenase.

Authors:  L K MacLachlan; P I Haris; D G Reid; J White; D Chapman; J A Lucy; B M Austen
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8.  Comparative modeling of the three-dimensional structure of type II antifreeze protein.

Authors:  F D Sönnichsen; B D Sykes; P L Davies
Journal:  Protein Sci       Date:  1995-03       Impact factor: 6.725

9.  Purification, characterization, and structural analysis of a plant low-temperature-induced protein.

Authors:  J G Boothe; F D Sönnichsen; M D de Beus; A M Johnson-Flanagan
Journal:  Plant Physiol       Date:  1997-02       Impact factor: 8.340

10.  Zinc-induced formation of a coactivator complex containing the zinc-sensing transcription factor MTF-1, p300/CBP, and Sp1.

Authors:  Yong Li; Tomoki Kimura; Ryan W Huyck; John H Laity; Glen K Andrews
Journal:  Mol Cell Biol       Date:  2008-05-05       Impact factor: 4.272

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