Literature DB >> 19591867

Measuring multiple spike train synchrony.

Thomas Kreuz1, Daniel Chicharro, Ralph G Andrzejak, Julie S Haas, Henry D I Abarbanel.   

Abstract

Measures of multiple spike train synchrony are essential in order to study issues such as spike timing reliability, network synchronization, and neuronal coding. These measures can broadly be divided in multivariate measures and averages over bivariate measures. One of the most recent bivariate approaches, the ISI-distance, employs the ratio of instantaneous interspike intervals (ISIs). In this study we propose two extensions of the ISI-distance, the straightforward averaged bivariate ISI-distance and the multivariate ISI-diversity based on the coefficient of variation. Like the original measure these extensions combine many properties desirable in applications to real data. In particular, they are parameter-free, time scale independent, and easy to visualize in a time-resolved manner, as we illustrate with in vitro recordings from a cortical neuron. Using a simulated network of Hindemarsh-Rose neurons as a controlled configuration we compare the performance of our methods in distinguishing different levels of multi-neuron spike train synchrony to the performance of six other previously published measures. We show and explain why the averaged bivariate measures perform better than the multivariate ones and why the multivariate ISI-diversity is the best performer among the multivariate methods. Finally, in a comparison against standard methods that rely on moving window estimates, we use single-unit monkey data to demonstrate the advantages of the instantaneous nature of our methods.

Mesh:

Year:  2009        PMID: 19591867     DOI: 10.1016/j.jneumeth.2009.06.039

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  10 in total

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2.  SPIKY: a graphical user interface for monitoring spike train synchrony.

Authors:  Thomas Kreuz; Mario Mulansky; Nebojsa Bozanic
Journal:  J Neurophysiol       Date:  2015-03-04       Impact factor: 2.714

3.  Synchronization study in ring-like and grid-like neuronal networks.

Authors:  Jingyi Qu; Rubin Wang; Ying Du; Jianting Cao
Journal:  Cogn Neurodyn       Date:  2011-09-13       Impact factor: 5.082

Review 4.  Graph analysis of functional brain networks: practical issues in translational neuroscience.

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5.  Establishing Communication between Neuronal Populations through Competitive Entrainment.

Authors:  Mark Wildie; Murray Shanahan
Journal:  Front Comput Neurosci       Date:  2012-01-12       Impact factor: 2.380

6.  Measures of spike train synchrony for data with multiple time scales.

Authors:  Eero Satuvuori; Mario Mulansky; Nebojsa Bozanic; Irene Malvestio; Fleur Zeldenrust; Kerstin Lenk; Thomas Kreuz
Journal:  J Neurosci Methods       Date:  2017-06-03       Impact factor: 2.390

7.  Detecting intermittent switching leadership in coupled dynamical systems.

Authors:  Violet Mwaffo; Jishnu Keshavan; Tyson L Hedrick; Sean Humbert
Journal:  Sci Rep       Date:  2018-07-09       Impact factor: 4.379

8.  Sudden synchrony leaps accompanied by frequency multiplications in neuronal activity.

Authors:  Roni Vardi; Amir Goldental; Shoshana Guberman; Alexander Kalmanovich; Hagar Marmari; Ido Kanter
Journal:  Front Neural Circuits       Date:  2013-10-30       Impact factor: 3.492

9.  Feed-Forward Propagation of Temporal and Rate Information between Cortical Populations during Coherent Activation in Engineered In Vitro Networks.

Authors:  Thomas B DeMarse; Liangbin Pan; Sankaraleengam Alagapan; Gregory J Brewer; Bruce C Wheeler
Journal:  Front Neural Circuits       Date:  2016-04-22       Impact factor: 3.492

10.  Simulation model of CA1 pyramidal neurons reveal opposing roles for the Na+/Ca2+ exchange current and Ca2+-activated K+ current during spike-timing dependent synaptic plasticity.

Authors:  Damien M O'Halloran
Journal:  PLoS One       Date:  2020-03-09       Impact factor: 3.240

  10 in total

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