Literature DB >> 19587298

Rapid and highly sensitive neuraminidase subtyping of avian influenza viruses by use of a diagnostic DNA microarray.

Astrid Gall1, Bernd Hoffmann, Timm Harder, Christian Grund, Ralf Ehricht, Martin Beer.   

Abstract

Rapid neuraminidase subtyping of avian influenza viruses from diagnostic samples is crucial considering the existence of permanently emerging and evolving strains. Here we report an easy-to-use, low-cost microarray for neuraminidase subtyping following fragment amplification by a generic, neuraminidase-specific reverse transcription-PCR (RT-PCR). This method enables highly specific characterization with a sensitivity equal to that of matrix gene-specific real-time RT-PCR.

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Year:  2009        PMID： 19587298      PMCID： PMC2738067          DOI： 10.1128/JCM.00850-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  13 in total

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5.  Genetic subtyping of influenza A viruses using RT-PCR with a single set of primers based on conserved sequences within the HA2 coding region.

Authors:  L P Phipps; S C Essen; I H Brown
Journal:  J Virol Methods       Date:  2004-12-01       Impact factor: 2.014

6.  Universal primer set for amplification and sequencing of HA0 cleavage sites of all influenza A viruses.

Authors:  Astrid Gall; Bernd Hoffmann; Timm Harder; Christian Grund; Martin Beer
Journal:  J Clin Microbiol       Date:  2008-06-18       Impact factor: 5.948

7.  Rapid haemagglutinin subtyping and pathotyping of avian influenza viruses by a DNA microarray.

Authors:  Astrid Gall; Bernd Hoffmann; Timm Harder; Christian Grund; Ralf Ehricht; Martin Beer
Journal:  J Virol Methods       Date:  2009-05-15       Impact factor: 2.014

8.  Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes.

Authors:  Erica Spackman; Dennis A Senne; T J Myers; Leslie L Bulaga; Lindsey P Garber; Michael L Perdue; Kenton Lohman; Luke T Daum; David L Suarez
Journal:  J Clin Microbiol       Date:  2002-09       Impact factor: 5.948

9.  Design and validation of a microarray for detection, hemagglutinin subtyping, and pathotyping of avian influenza viruses.

Authors:  Astrid Gall; Bernd Hoffmann; Timm Harder; Christian Grund; Dirk Höper; Martin Beer
Journal:  J Clin Microbiol       Date:  2008-12-03       Impact factor: 5.948

10.  A broad spectrum, one-step reverse-transcription PCR amplification of the neuraminidase gene from multiple subtypes of influenza A virus.

Authors:  Alejandra Castillo Alvarez; Marion E G Brunck; Victoria Boyd; Richard Lai; Elena Virtue; Wenbin Chen; Cheryl Bletchly; Hans G Heine; Ross Barnard
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  15 in total

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Journal:  J Virol Methods       Date:  2014-07-24       Impact factor: 2.014

2.  Unusual H5N2 avian influenza virus escapes current detection.

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3.  Isolation and phylogenetic characterization of haemagglutinin and neuraminidase genes of H9N2 low pathogenicity avian influenza virus isolated from commercial layers in India.

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5.  High-resolution genotyping of Chlamydia trachomatis by use of a novel multilocus typing DNA microarray.

Authors:  Linus Christerson; Anke Ruettger; Kirsten Gravningen; Ralf Ehricht; Konrad Sachse; Björn Herrmann
Journal:  J Clin Microbiol       Date:  2011-06-22       Impact factor: 5.948

6.  Full-Genome Sequence of Influenza A(H5N8) Virus in Poultry Linked to Sequences of Strains from Asia, the Netherlands, 2014.

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7.  Neuraminidase subtyping of avian influenza viruses with PrimerHunter-designed primers and quadruplicate primer pools.

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Journal:  Influenza Other Respir Viruses       Date:  2016-08-09       Impact factor: 4.380

9.  Riems influenza a typing array (RITA): An RT-qPCR-based low density array for subtyping avian and mammalian influenza a viruses.

Authors:  Bernd Hoffmann; Donata Hoffmann; Dinah Henritzi; Martin Beer; Timm C Harder
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10.  Evaluation of a smartphone-based rapid fluorescent diagnostic system for H9N2 virus in specific-pathogen-free chickens.

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