Literature DB >> 19580872

Crystal structure of the in vivo-assembled Bacillus subtilis Spx/RNA polymerase alpha subunit C-terminal domain complex.

Valerie Lamour1, Lars F Westblade, Elizabeth A Campbell, Seth A Darst.   

Abstract

The Bacillus subtilis Spx protein is a global transcription factor that interacts with the C-terminal domain of the RNA polymerase alpha subunit (alphaCTD) and regulates transcription of genes involved in thiol-oxidative stress, sporulation, competence, and organosulfur metabolism. Here we determined the X-ray crystal structure of the Spx/alphaCTD complex from an entirely new crystal form than previously reported [Newberry, K.J., Nakano, S., Zuber, P., Brennan, R.G., 2005. Crystal structure of the Bacillus subtilis anti-alpha, global transcriptional regulator, Spx, in complex with the alpha C-terminal domain of RNA polymerase. Proc. Natl. Acad. Sci. USA 102, 15839-15844]. Comparison of the previously reported sulfate-bound complex and our sulfate-free complex reveals subtle conformational changes that may be important for the role of Spx in regulating organosulfur metabolism.

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Year:  2009        PMID: 19580872      PMCID: PMC2757488          DOI: 10.1016/j.jsb.2009.07.001

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  25 in total

1.  Determinants of the C-terminal domain of the Escherichia coli RNA polymerase alpha subunit important for transcription at class I cyclic AMP receptor protein-dependent promoters.

Authors:  Nigel J Savery; Georgina S Lloyd; Stephen J W Busby; Mark S Thomas; Richard H Ebright; Richard L Gourse
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

Review 2.  UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition.

Authors:  R L Gourse; W Ross; T Gaal
Journal:  Mol Microbiol       Date:  2000-08       Impact factor: 3.501

3.  A regulatory protein that interferes with activator-stimulated transcription in bacteria.

Authors:  Shunji Nakano; Michiko M Nakano; Ying Zhang; Montira Leelakriangsak; Peter Zuber
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

4.  Structural basis of transcription activation: the CAP-alpha CTD-DNA complex.

Authors:  Brian Benoff; Huanwang Yang; Catherine L Lawson; Gary Parkinson; Jinsong Liu; Erich Blatter; Yon W Ebright; Helen M Berman; Richard H Ebright
Journal:  Science       Date:  2002-08-30       Impact factor: 47.728

5.  Sulfate-dependent repression of genes that function in organosulfur metabolism in Bacillus subtilis requires Spx.

Authors:  Kyle N Erwin; Shunji Nakano; Peter Zuber
Journal:  J Bacteriol       Date:  2005-06       Impact factor: 3.490

6.  Crystal structure of the Bacillus subtilis anti-alpha, global transcriptional regulator, Spx, in complex with the alpha C-terminal domain of RNA polymerase.

Authors:  Kate J Newberry; Shunji Nakano; Peter Zuber; Richard G Brennan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-25       Impact factor: 11.205

7.  Loss-of-function mutations in yjbD result in ClpX- and ClpP-independent competence development of Bacillus subtilis.

Authors:  M M Nakano; F Hajarizadeh; Y Zhu; P Zuber
Journal:  Mol Microbiol       Date:  2001-10       Impact factor: 3.501

8.  Insights into the structure, solvation, and mechanism of ArsC arsenate reductase, a novel arsenic detoxification enzyme.

Authors:  P Martin; S DeMel; J Shi; T Gladysheva; D L Gatti; B P Rosen; B F Edwards
Journal:  Structure       Date:  2001-11       Impact factor: 5.006

9.  Spx-dependent global transcriptional control is induced by thiol-specific oxidative stress in Bacillus subtilis.

Authors:  Shunji Nakano; Elke Küster-Schöck; Alan D Grossman; Peter Zuber
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-03       Impact factor: 11.205

10.  An intersubunit contact stimulating transcription initiation by E coli RNA polymerase: interaction of the alpha C-terminal domain and sigma region 4.

Authors:  Wilma Ross; David A Schneider; Brian J Paul; Aaron Mertens; Richard L Gourse
Journal:  Genes Dev       Date:  2003-05-15       Impact factor: 11.361

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  17 in total

1.  Evidence that a single monomer of Spx can productively interact with RNA polymerase in Bacillus subtilis.

Authors:  Ann A Lin; Peter Zuber
Journal:  J Bacteriol       Date:  2012-02-03       Impact factor: 3.490

2.  Rifampin Resistance rpoB Alleles or Multicopy Thioredoxin/Thioredoxin Reductase Suppresses the Lethality of Disruption of the Global Stress Regulator spx in Staphylococcus aureus.

Authors:  Maite Villanueva; Ambre Jousselin; Kristoffer T Baek; Julien Prados; Diego O Andrey; Adriana Renzoni; Hanne Ingmer; Dorte Frees; William L Kelley
Journal:  J Bacteriol       Date:  2016-09-09       Impact factor: 3.490

3.  Residue substitutions near the redox center of Bacillus subtilis Spx affect RNA polymerase interaction, redox control, and Spx-DNA contact at a conserved cis-acting element.

Authors:  Ann A Lin; Don Walthers; Peter Zuber
Journal:  J Bacteriol       Date:  2013-09       Impact factor: 3.490

Review 4.  Thiol-based redox switches and gene regulation.

Authors:  Haike Antelmann; John D Helmann
Journal:  Antioxid Redox Signal       Date:  2010-10-28       Impact factor: 8.401

Review 5.  Local and global regulation of transcription initiation in bacteria.

Authors:  Douglas F Browning; Stephen J W Busby
Journal:  Nat Rev Microbiol       Date:  2016-08-08       Impact factor: 60.633

6.  Exploring the Amino Acid Residue Requirements of the RNA Polymerase (RNAP) α Subunit C-Terminal Domain for Productive Interaction between Spx and RNAP of Bacillus subtilis.

Authors:  Cierra A Birch; Madison J Davis; Lea Mbengi; Peter Zuber
Journal:  J Bacteriol       Date:  2017-06-27       Impact factor: 3.490

7.  The Spx regulator modulates stress responses and virulence in Enterococcus faecalis.

Authors:  Jessica K Kajfasz; Jorge E Mendoza; Anthony O Gaca; James H Miller; Kristy A Koselny; Marcia Giambiagi-Demarval; Melanie Wellington; Jacqueline Abranches; José A Lemos
Journal:  Infect Immun       Date:  2012-04-16       Impact factor: 3.441

8.  spxA2, encoding a regulator of stress resistance in Bacillus anthracis, is controlled by SaiR, a new member of the Rrf2 protein family.

Authors:  Michiko M Nakano; Wren Kominos-Marvell; Bhagyashree Sane; Yaldah Mohammad Nader; Skye M Barendt; Marcus B Jones; Peter Zuber
Journal:  Mol Microbiol       Date:  2014-10-16       Impact factor: 3.501

9.  Evidence that Oxidative Stress Induces spxA2 Transcription in Bacillus anthracis Sterne through a Mechanism Requiring SpxA1 and Positive Autoregulation.

Authors:  Skye Barendt; Cierra Birch; Lea Mbengi; Peter Zuber
Journal:  J Bacteriol       Date:  2016-10-07       Impact factor: 3.490

10.  Promoter recognition by a complex of Spx and the C-terminal domain of the RNA polymerase alpha subunit.

Authors:  Michiko M Nakano; Ann Lin; Cole S Zuber; Kate J Newberry; Richard G Brennan; Peter Zuber
Journal:  PLoS One       Date:  2010-01-13       Impact factor: 3.240

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