| Literature DB >> 19574418 |
Shijian Liu1, Hongwei Zhang, Chunying Gu, Jianhua Yin, Yongchao He, Jiaxin Xie, Guangwen Cao.
Abstract
BACKGROUND: The association between hepatitis B virus (HBV) mutations and hepatocarcinogenesis remains controversial because of conflicting data in the literature. We conducted a meta-analysis of case-control and cohort studies to examine HBV PreS, enhancer II (EnhII), basal core promoter (BCP), and precore mutations in relation to the risk of hepatocellular carcinoma (HCC).Entities:
Mesh:
Substances:
Year: 2009 PMID: 19574418 PMCID: PMC2720989 DOI: 10.1093/jnci/djp180
Source DB: PubMed Journal: J Natl Cancer Inst ISSN: 0027-8874 Impact factor: 13.506
Quality criteria for the included studies*
| Score | |||
| Quality parameter | 2 | 1 | 0 |
| Study design | Cohort study or nested case–control study | Incidence case–control study. Prevalence case–control study | — |
| No. of case subjects | >100 | 50–100 | <50 |
| Source of population | Community-based or from two or more countries | ≥2 hospitals | 1 hospital |
| Mutation detection method | DNA sequencing | Line probe assay (eg, INNO-LiPA, OLA) | RFLP, PAGE, self-made chips, microwell hybridization, or direct electrophoresis |
| Matching of case and control subjects | |||
| Confounder group 1 | Age and sex | Age or sex | None |
| Confounder group 2 | HBeAg status and HBV genotype | HBeAg status or HBV genotype | None |
— = designs other than cohort or nested, incidence, or prevalence case–control not included in meta-analysis; INNO-LiPA = Innogenetics line probe assay; OLA = oligonucleotide ligation assay; RFLP = restriction fragment length polymorphism; PAGE = polyacrylamide gel electrophoresis; HBeAg = hepatitis B e antigen; HBV = hepatitis B virus.
Figure 1Flow chart of article selection. HBV = hepatitis B virus; HCC = hepatocellular carcinoma; HCV = hepatitis C virus; HDV = hepatitis D virus.
Characteristics of studies included in the meta-analysis*
| Matching factors | ||||||||||||||
| Study: first author, year (reference) | Design | Country or area | Mean age, y | Male (%) | No. of case subjects | No. of control subjects or subjects in cohort | Mutation site | Detection method | HBV genotype | Age | Sex | HBeAg status | Genotype | Quality score |
| Huy, 2003 ( | PCC | 12 countries | − | − | 49 | 338 | PreS1, PreS2 | S | A, B, C, D, E, F | − | − | − | − | 5–7 |
| Kim, 2008 ( | PCC | Korea | − | − | 60 | 124 | C1653T, T1753V, A1762T/G1764A | S | C | − | − | − | + | 5–7 |
| Mun, 2008 ( | PCC | Korea | − | − | 40 | 80 | PreS1, PreS2 | S | C2 | − | − | − | + | 5–7 |
| Sakamoto, 2006 ( | PCC | Japan, Philippines | 53.7 | 87 | 31 | 69 | C1653T, A1762T/G1764A, C1858T, G1862T, G1888H, G1809T, C1812T, G1896A | S | A, B, C | − | + | − | − | 5–7 |
| Yuan, 2007 ( | PCC | China | 49.5 | 91.2 | 34 | 207 | C1653T, T1753V, A1762T/G1764A, T1856C, C1858T, G1896A, G1898A, G1899A | S | B, C | + | + | − | + | 5–7 |
| Zhang, 2006 ( | PCC | China | − | − | 30 | 57 | A1762T/G1764A | H | ND | − | − | − | − | ≤4 |
| Zhou, 2007 ( | PCC | China | − | − | 36 | 78 | A1762T/G1764A, G1896A | H | ND | − | − | − | − | ≤4 |
| Baptista, 1999 ( | PCC | South Africa | − | − | 59 | 52 | T1753V, A1762T/G1764A, G1809T, C1812T | S | ND | + | − | − | − | 5–7 |
| Blackberg, 2003 ( | PCC | Sweden, others | 61 | 81.3 | 16 | 19 | T1753V, A1762T/G1764A, G1896A, PreS1, PreS2 | S | A, B, C, D | − | + | + | + | ≥8 |
| Chen, 2006 ( | PCC | Taiwan | 45.2 | 88.0 | 50 | 102 | A1762T/G1764A, G1896A, PreS | INNO-LiPA | B, C | + | − | − | − | 5–7 |
| Choi, 2007 ( | PCC | Korea | 51.9 | 80.6 | 72 | 228 | PreS1, PreS2 | S | C | − | − | + | + | 5–7 |
| Deng, 2004 ( | ICC | China | − | − | 114 | 100 | A1762T/G1764A | PCR and ELISA | ND | − | − | − | − | ≤4 |
| Ding, 2006 ( | ICC | China | 47.5 | 87.5 | 40 | 40 | A1762T/G1764A | GC | B, C | − | − | − | − | ≤4 |
| Fang, 2002 ( | PCC | China | − | − | 36 | 115 | A1762T/G1764A, G1896A | S | B, C | − | − | − | − | ≤4 |
| Gao, 2007 ( | PCC | China | 55.6 | 88.5 | 26 | 53 | PreS1, PreS2 | S | C | − | − | − | + | 5–7 |
| Ito, 2006 ( | ICC | Japan, United States, Hong Kong | 50.7 | 90.0 | 40 | 80 | C1653T, T1753V, A1762T/G1764A, G1896A | S | ND | + | + | + | + | ≥8 |
| Laskus, 1998 ( | ICC | Gambia | 45.4 | 85 | 27 | 33 | A1762T/G1764A, G1896A, G1899A | S | ND | + | + | − | − | 5–7 |
| Lin, 2007 ( | ICC | Taiwan | 55 | 89 | 64 | 202 | PreS | E | B, C | − | − | − | + | ≤4 |
| Liu, 2006 ( | PCC | Taiwan | 54 | 61.9 | 200 | 160 | A1762T/G1764A, G1896A | INNO-LiPA | B, C | − | − | − | − | ≤4 |
| Livingston, 2007 ( | ICC | United States | 39.1 | 74 | 47 | 1129 | A1762T/G1764A, G1896A | INNO-LiPA | A, C, D, F | + | + | − | + | 5–7 |
| Muroyama, 2006 ( | PCC | Japan | 56.5 | 95 | 39 | 36 | C1485T, A1762T/G1764A, G1896A | S | C | + | + | − | + | 5–7 |
| Mendy, 2008 ( | PCC | Gambia | − | − | 138 | 89 | A1762T/G1764A, G1896A | OLA | ND | − | − | − | − | ≤4 |
| Ni, 2003 ( | ICC | Taiwan | 9.6 | 75 | 12 | 31 | G1896A | S | ND | + | − | − | − | ≤4 |
| Shinkai, 2007 ( | PCC | Japan | 55 | 85.0 | 80 | 80 | C1653T, T1479C, C1485T, G1499H, G1613A, T1753V, A1762T/G1764A, G1896A | S | C2 | + | + | + | + | ≥8 |
| Song, 2005 ( | PCC | Vietnam | 56 | 83.3 | 48 | 74 | A1762T/G1764A, G1766A, T1773C, C1858T | S | ND | − | + | − | − | ≤4 |
| Sugauchi, 2003 ( | PCC | Japan | − | − | 24 | 136 | PreS1, PreS2 | S | B, C | + | + | + | − | 5–7 |
| Sung, 2008 ( | ICC | Hong Kong | 51 | 80 | 100 | 100 | T31C, T53C, C1165T, A1499G, G1613A, A1762T/G1764A, G1899A, T2170C/G, T2441C, A/T2525C, T2712V | S | B, C1, C2 | + | + | − | − | 5–7 |
| Tanaka, 2006 ( | PCC | Japan, Hong Kong | 50.2 | 78.0 | 148 | 180 | C1653T, T1753V, A1762T/G1764A, T1765V, G1896A, G1899A | S | ND | + | + | + | − | ≥8 |
| Takahashi, 1999 ( | PCC | Japan | − | − | 58 | 271 | C1653T, T1753V, A1762T, G1764A, A1762T/G1764A | S | C | + | − | − | + | 5–7 |
| Tong, 2007 ( | ICC | United States | 53.3 | 83.2 | 101 | 110 | A1762T/G1764A, G1896A | S | A, B, C, D | − | − | − | − | 5–7 |
| Truong, 2007 ( | PCC | Japan, Vietnam | 49.2 | 93.7 | 32 | 95 | C1653T, T1753V, A1762T/G1764A, C1858T, G1896A | S | C | − | − | + | + | 5–7 |
| Wang, 2007 ( | PCC | China | 49.8 | 89.4 | 47 | 164 | C1653T, T1753V, A1762T/G1764A, 1856C/T, C1858T, G1896A, A1898G, G1899A | S | B2, C1, C2 | − | + | − | − | 5–7 |
| Yuen, 2008 ( | ICC | Hong Kong | 57.5 | 80.2 | 248 | 248 | C1653T, T1753V, A1762T/G1764A, G1896A | S | B, C | + | + | + | − | ≥8 |
| Zhang, 2007 ( | PCC | China | − | − | 27 | 72 | A1762T/G1764A | H | B, C, D | − | − | − | − | ≤4 |
| Cao, 2008 ( | NCC | China | 42.1 | 95.7 | 47 | 50 | PreS1, PreS2 | RFLP and PAGE | ND | + | + | − | − | ≥8 |
| Chou, 2008 ( | NCC | Taiwan | 56.2 | 100 | 154 | 316 | C1726A, T1727A, G1730C, T1753V, G1799C, A1762T/G1764A, G1896A | S | A, B, C | + | − | − | − | ≥8 |
| Guo, 2008 ( | NCC | China | 41.9 | 95.8 | 58 | 71 | C1653T, T1753V, A1762T/G1764A, C1766T | S | B, C | + | + | − | − | ≥8 |
| Kao, 2003 ( | NCC | Taiwan | 55 | 85 | 127 | 123 | A1752G/T, A1762T/G1764A, T1753V, C1773T/A, 1799G/C, G1896A | S | B, C | + | + | − | + | ≥8 |
| Zhang, 2007 ( | NCC | China | − | − | 32 | 32 | A1762T/G1764A | S | ND | + | + | − | − | ≥8 |
| Zhu, 2008 ( | NCC | China | − | − | 20 | 83 | C1726A, G1730C, A1752G, A1762T/G1764A | S | C | + | + | + | + | ≥8 |
| Tong, 2006 ( | Cohort | United States | 57.4 | 90.3 | 31 | 369 | A1762T/G1764A, G1896A | S | A, B, C | − | − | + | + | ≥8 |
| Jang, 2007 ( | Cohort | Korea | 47.2 | 50 | 6 | 23 | A1762T/G1764A, G1896A | S | C | − | − | + | − | 5–7 |
| Yang, 2008 ( | Cohort | Taiwan | − | 57 | 153 | 2762 | A1762T/G1764A, G1896A | S | B, C | − | − | − | − | ≥8 |
HBV = hepatitis B virus; HBeAg = hepatitis B e antigen; PCC = prevalence case–control; − = data not available; S = sequencing; + = matched; H = hybridization; ND = genotype undetermined; INNO-LiPA = Innogenetics line probe assay; ICC = incidence case–control; PCR = polymerase chain reaction; ELISA = enzyme-linked immunosorbent assay; GC = gene chip; E = electrophoresis; OLA = oligonucleotide ligation assay; NCC = nested case–control; RFLP = restriction fragment length polymorphism; PAGE = polyacrylamide gel electrophoresis.
Vietnam, Nepal, Myanmar, China, Korea, Thailand, Japan, Ghana, Russia, Spain, United States, and Bolivia.
Combined mutation data were extracted from this reference.
Others = the former Yugoslavia, Turkey, the Middle East, Poland, Greece, New Zealand, and Asia.
Figure 2Summary odds ratios (ORs; in case–control studies) or relative risks (RRs; in cohort studies) of hepatocellular carcinoma (HCC) for PreS (A), C1653T (B), T1753V (C), A1762T/G1764A (D), C1858T (E), and G1896A (F) mutations. Squares represent study-specific estimates (size of the square reflects the study-specific statistical weight); horizontal lines represent 95% confidence intervals (CIs); diamonds represent summary estimates with corresponding 95% CIs. Test for heterogeneity: (A) P = .045, I2 = 49.3%; (B) P = .197, I2 = 25.9%; (C) P < .001, I2 = 66.3%; (D) P < .001, I2 = 76.4%; (E) P < .001, I2 = 83.2%; (F) P < .001, I2 = 80.0%. A random-effects model was used for all analyses. All statistical tests were two-sided. NCC = nested case–control; PCC = prevalence case–control; ICC = incidence case–control.
Figure 3Funnel plot of the logarithm of the odds ratio (OR) for PreS mutation vs no PreS mutation, and the SE of natural logarithm of the ORs for the included studies that examined PreS mutations. The dashed line represents 95% confidence intervals. Circles represent individual studies.
Summary odds ratios of hepatocellular carcinoma for hepatitis B virus mutations after matching or stratification*
| PreS | C1653T | T1753V | A1762T/G1764A | |||||
| Matching or stratification | No. of case subjects/No. of control subjects | OR (95% CI) | No. of case subjects/No. of control subjects | OR (95% CI) | No. of case subjects/No. of control subjects | OR (95% CI) | No. of case subjects/No. of control subjects | OR (95% CI) |
| Matching | ||||||||
| No | 267/846 | 3.80 (2.25 to 6.41) | 170/445 | 3.14 (1.98 to 4.99) | 155/395 | 2.68 (1.10 to 6.54) | 945/1614 | 4.59 (2.70 to 7.80) |
| Age | 121/288 | 3.92 (2.12 to 7.25) | 525/798 | 2.56 (1.98 to 3.32) | 657/1002 | 2.17 (1.46 to 3.22) | 1145/1685 | 3.16 (2.14 to 4.65) |
| Age + sex | 74/238 | 5.18 (2.52 to 10.63) | 467/569 | 2.42 (1.81 to 3.22) | 467/569 | 1.96 (1.17 to 3.27) | 855/1103 | 2.74 (1.68 to 4.49) |
| Age + sex + HBeAg status | 24/136 | 3.58 (1.44 to 8.89) | 401/439 | 2.64 (1.92 to 3.62) | 401/439 | 1.74 (0.93 to 3.24) | 482/655 | 3.81 (2.68 to 5.43) |
| Age + sex + HBeAg status + HBV genotype | — | — | 120/160 | 3.77 (2.26 to 6.27) | 120/160 | 2.03 (0.75 to 5.47) | 120/160 | 3.37 (1.64 to 6.92) |
| HBV genotype | ||||||||
| B | 91/261 | 3.81 (1.85 to 7.88) | — | — | — | — | 217/239 | 13.00 (3.72 to 45.30) |
| C | 142/456 | 6.55 (2.62 to 16.35) | 430/863 | 2.81 (2.16 to 3.64) | 421/805 | 2.19 (1.37 to 3.52) | 609/1000 | 4.44 (2.62 to 7.53) |
| C1 | — | — | 77/119 | 1.56 (0.74 to 3.29) | 77/119 | 3.10 (1.67 to 5.74) | 77/119 | 3.18 (1.44 to 7.05) |
| C2 | — | — | 191/288 | 2.47 (1.65 to 3.71) | 191/288 | 2.46 (1.61 to 3.75) | 191/288 | 2.83 (1.62 to 4.92) |
| Study location | ||||||||
| China + Taiwan + Hong Kong | 187/407 | 5.33 (2.34 to 12.13) | 246/393 | 2.45 (1.52 to 3.94) | 378/597 | 2.77 (1.16 to 6.59) | 1198/3122 | 4.00 (2.60 to 6.17) |
| Japan | 24/136 | 3.58 (1.44 to 8.89) | 169/378 | 3.19 (2.11 to 4.83) | 138/309 | 3.33 (2.10 to 5.27) | 214/396 | 3.27 (1.45 to 7.35) |
| Korea | 112/308 | 2.62 (1.66 to 4.16) | 60/124 | 2.93 (1.47 to 5.82) | 60/124 | 2.41 (1.21 to 4.80) | 66/144 | 4.65 (2.14 to 10.12) |
| Asia | 323/851 | 3.87 (2.45 to 6.09) | 595/1039 | 2.48 (1.93 to 3.19) | 756/1298 | 2.58 (1.73 to 3.84) | 1834/4022 | 3.87 (2.75 to 5.45) |
| Areas excluding Asia | — | — | — | — | — | — | 361/603 | 3.62 (1.57 to 8.37) |
| HBeAg status | ||||||||
| Positive | — | — | 109/148 | 4.49 (2.21 to 9.14) | 109/112 | 3.34 (1.82 to 6.14) | 134/163 | 6.58 (3.35 to 12.93) |
| Negative | — | — | 176/302 | 2.77 (1.87 to 4.11) | 176/302 | 2.90 (1.93 to 4.34) | 201/334 | 4.76 (2.80 to 8.10) |
| Quality score | ||||||||
| ≥8 | 63/69 | 7.64 (3.52 to 16.58) | 459/510 | 2.43 (1.82 to 3.25) | 607/733 | 1.84 (1.24 to 2.72) | 999/2878 | 2.93 (2.01 to 4.28) |
| 5–7 | 261/863 | 3.41 (2.13 to 5.44) | 236/733 | 3.17 (2.21 to 4.54) | 205/664 | 3.52 (1.89 to 6.54) | 584/1112 | 4.27 (2.58 to 7.08) |
| ≤4 | 64/202 | 2.99 (1.51 to 5.90) | — | — | — | — | 634/734 | 3.53 (1.69 to 7.34) |
CI = confidence interval; HBeAg = hepatitis B e antigen; — = data not available; HBV = hepatitis B virus; OR = odds ratio.
Figure 4Frequencies of PreS, C1653T, T1753V, or A1762T/G1764A mutations among asymptomatic hepatitis B surface antigen carriers (ASC), patients with chronic hepatitis B (CHB), patients with liver cirrhosis (LC), and patients with hepatocellular carcinoma (HCC) from the pooled data. P values (two-sided) are from the χ2 test. Absolute numbers of the participants with hepatitis B virus mutation data are shown on the top of each column. The numerators represent the number of the patients (participants) with the mutation(s). The denominators represent subtotal number of the patients (participants) with and without the mutation(s).
Sensitivity and specificity of single and combined mutations of hepatitis B virus for the prediction of hepatocellular carcinoma*
| Mutation status | No. of HCC patients | No. of patients without HCC | Sensitivity, % (95% CI) | Specificity, % (95% CI) |
| PreS | ||||
| Positive | 187 | 219 | 48.2 (43.2 to 53.2) | 80.7 (78.4 to 83.0) |
| Negative | 201 | 915 | ||
| C1653T | ||||
| Positive | 257 | 225 | 40.0 (33.4 to 40.1) | 81.9 (79.8 to 84.0) |
| Negative | 438 | 1018 | ||
| T1753V | ||||
| Positive | 317 | 284 | 39.0 (35.7 to 42.4) | 79.7 (77.6 to 81.8) |
| Negative | 495 | 1113 | ||
| A1762T/G1764A | ||||
| Positive | 1566 | 1861 | 70.6 (68.7 to 72.5) | 60.6 (59.2 to 62.0) |
| Negative | 651 | 2863 | ||
| C1653T + T1753V | ||||
| Positive | 40 | 17 | 20.6 (14.9 to 26.3) | 92.6 (89.2 to 96.0) |
| Negative | 154 | 212 | ||
| A1762T/G1764A + PreS | ||||
| Positive | 24 | 22 | 43.6 (30.5 to 56.7) | 79.2 (71.5 to 87.0) |
| Negative | 31 | 84 | ||
| A1762T/G1764A + C1653T | ||||
| Positive | 66 | 31 | 43.4 (35.5 to 51.3) | 84.2 (79.1 to 89.3) |
| Negative | 86 | 165 | ||
| A1762T/G1764A + T1753V | ||||
| Positive | 106 | 62 | 51.7 (44.9 to 58.5) | 80.4 (76.1 to 84.8) |
| Negative | 99 | 255 | ||
| A1762T/G1764A + C1653T + T1753V | ||||
| Positive | 37 | 12 | 24.3 (17.5 to 31.1) | 93.9 (90.5 to 97.2) |
| Negative | 115 | 184 | ||
Data extracted from all included studies. CI = confidence interval; HCC = hepatocellular carcinoma.
Includes asymptomatic hepatitis B surface antigen carriers, and patients with chronic hepatitis B or liver cirrhosis, and unclassified hepatitis B virus–infected participants without HCC.
Includes the indicated mutation alone and in combination with other mutations.