Literature DB >> 19563207

Reverse type I binding spectra of human cytochrome P450 1B1 induced by flavonoid, stilbene, pyrene, naphthalene, phenanthrene, and biphenyl derivatives that inhibit catalytic activity: a structure-function relationship study.

Tsutomu Shimada1, Katsuhiro Tanaka, Shigeo Takenaka, Maryam K Foroozesh, Norie Murayama, Hiroshi Yamazaki, F Peter Guengerich, Masayuki Komori.   

Abstract

Fifty-one chemicals including derivatives of 16 flavonoids, three stilbenes, six pyrenes, seven naphthalenes, seven phenanthrenes, 10 biphenyls, 17beta-estradiol, and estrone were examined for their abilities to induce reverse type I binding spectra with human cytochrome P450 (P450) 1B1 and to inhibit 7-ethoxyresorufin O-deethylation (EROD) activities catalyzed by P450 1B1. Forty-nine chemicals showed reverse type I spectra with P450 1B1, and we found that 3,5,7-trihydroxyflavone, 3',4'-dimethoxy-5,7-dihydroxyflavone, 4'-methoxy-5,7-dihydroxyflavone, alpha- and beta-naphthoflavones, 2,4,3',5'-tetramethoxystilbene, pyrene, and several acetylenic pyrenes and phenanthrenes were strong inducers of the spectra and also potent inhibitors of EROD activities catalyzed by P450 1B1. The spectral dissociation constant (K(s)) and the magnitude of the binding (DeltaA(max)/K(s)) of 49 chemicals were correlated with the inhibition potencies of EROD activities by these chemicals [correlation coefficients (r) of 0.72 and 0.74, respectively]. The K(s) and DeltaA(max)/K(s) values were more correlated with IC(50) values when compared in a group of derivatives of flavonoids, stilbenes, and estrogens (r = 0.81 and 0.88, respectively) or a group of derivatives of pyrenes, naphthalenes, phenanthrenes, and biphenyls (r = 0.88 and 0.91, respectively). Among 14 flavonoids examined, 3,5,7-trihydroxyflavone and 4'-methoxy- and 3',4'-dimethoxy-5,7-dihydroxyflavone were more active than flavone in interacting with P450 1B1, but the respective 7,8-dihydroxyflavones were less active. Pyrene itself was highly active in interacting with P450 1B1, but its binding was slightly decreased when substituted with acetylenic groups. In contrast, substitution of naphthalene with methyl and ethyl propargyl ethers led to more interaction with P450 1B1 than with naphthalene itself. Similarly, substitution on phenanthrene or biphenyl with acetylenic groups and propargyl ethers increased affinities to P450 1B1. These results suggest that the reverse type I binding of chemicals to P450 1B1 may determine how they interact with and inhibit the catalytic activity of the enzyme. Substitutions on the compounds with various acetylenic groups and propargyl ethers cause an increase or decrease of their affinities to P450 1B1, depending on the parent compound used.

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Year:  2009        PMID: 19563207      PMCID: PMC3845904          DOI: 10.1021/tx900127s

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  38 in total

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3.  Kinetics and thermodynamics of ligand binding by cytochrome P450 3A4.

Authors:  Emre M Isin; F Peter Guengerich
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4.  Urban dust particulate matter alters PAH-induced carcinogenesis by inhibition of CYP1A1 and CYP1B1.

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Journal:  Toxicol Sci       Date:  2006-10-23       Impact factor: 4.849

5.  Effects of hydroxyl group numbers on the B-ring of 5,7-dihydroxyflavones on the differential inhibition of human CYP 1A and CYP1B1 enzymes.

Authors:  Hyun-Jung Kim; Sang Bum Lee; Song-Kyu Park; Hwan Mook Kim; Young In Park; Mi-Sook Dong
Journal:  Arch Pharm Res       Date:  2005-10       Impact factor: 4.946

Review 6.  Dietary flavonoids: effects on xenobiotic and carcinogen metabolism.

Authors:  Young Jin Moon; Xiaodong Wang; Marilyn E Morris
Journal:  Toxicol In Vitro       Date:  2005-11-11       Impact factor: 3.500

7.  Inhibition of human cytochrome P450-catalyzed oxidations of xenobiotics and procarcinogens by synthetic organoselenium compounds.

Authors:  T Shimada; K El-Bayoumy; P Upadhyaya; T R Sutter; F P Guengerich; H Yamazaki
Journal:  Cancer Res       Date:  1997-11-01       Impact factor: 12.701

8.  Methylated flavonoids have greatly improved intestinal absorption and metabolic stability.

Authors:  Xia Wen; Thomas Walle
Journal:  Drug Metab Dispos       Date:  2006-07-25       Impact factor: 3.922

9.  Inhibition of human cytochrome P450 1A1-, 1A2-, and 1B1-mediated activation of procarcinogens to genotoxic metabolites by polycyclic aromatic hydrocarbons.

Authors:  Tsutomu Shimada; F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2006-02       Impact factor: 3.739

10.  Selectivity of polycyclic inhibitors for human cytochrome P450s 1A1, 1A2, and 1B1.

Authors:  T Shimada; H Yamazaki; M Foroozesh; N E Hopkins; W L Alworth; F P Guengerich
Journal:  Chem Res Toxicol       Date:  1998-09       Impact factor: 3.739

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  19 in total

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2.  Drug modulation of water-heme interactions in low-spin P450 complexes of CYP2C9d and CYP125A1.

Authors:  Kip P Conner; Alex A Cruce; Matthew D Krzyaniak; Alina M Schimpf; Daniel J Frank; Paul Ortiz de Montellano; William M Atkins; Michael K Bowman
Journal:  Biochemistry       Date:  2015-01-29       Impact factor: 3.162

3.  Spectral modification and catalytic inhibition of human cytochromes P450 1A1, 1A2, 1B1, 2A6, and 2A13 by four chemopreventive organoselenium compounds.

Authors:  Tsutomu Shimada; Norie Murayama; Katsuhiro Tanaka; Shigeo Takenaka; F Peter Guengerich; Hiroshi Yamazaki; Masayuki Komori
Journal:  Chem Res Toxicol       Date:  2011-07-20       Impact factor: 3.739

4.  Metabolic activation of polycyclic aromatic hydrocarbons and aryl and heterocyclic amines by human cytochromes P450 2A13 and 2A6.

Authors:  Tsutomu Shimada; Norie Murayama; Hiroshi Yamazaki; Katsuhiro Tanaka; Shigeo Takenaka; Masayuki Komori; Donghak Kim; F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2013-03-13       Impact factor: 3.739

5.  Binding of diverse environmental chemicals with human cytochromes P450 2A13, 2A6, and 1B1 and enzyme inhibition.

Authors:  Tsutomu Shimada; Donghak Kim; Norie Murayama; Katsuhiro Tanaka; Shigeo Takenaka; Leslie D Nagy; Lindsay M Folkman; Maryam K Foroozesh; Masayuki Komori; Hiroshi Yamazaki; F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2013-03-13       Impact factor: 3.739

6.  Structure-function relationships of inhibition of human cytochromes P450 1A1, 1A2, 1B1, 2C9, and 3A4 by 33 flavonoid derivatives.

Authors:  Tsutomu Shimada; Katsuhiro Tanaka; Shigeo Takenaka; Norie Murayama; Martha V Martin; Maryam K Foroozesh; Hiroshi Yamazaki; F Peter Guengerich; Masayuki Komori
Journal:  Chem Res Toxicol       Date:  2010-12-20       Impact factor: 3.739

7.  CW EPR parameters reveal cytochrome P450 ligand binding modes.

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8.  Roles of Human CYP2A6 and Monkey CYP2A24 and 2A26 Cytochrome P450 Enzymes in the Oxidation of 2,5,2',5'-Tetrachlorobiphenyl.

Authors:  Tsutomu Shimada; Kensaku Kakimoto; Shigeo Takenaka; Nobuyuki Koga; Shotaro Uehara; Norie Murayama; Hiroshi Yamazaki; Donghak Kim; F Peter Guengerich; Masayuki Komori
Journal:  Drug Metab Dispos       Date:  2016-09-13       Impact factor: 3.922

9.  Structure-Function Studies of Naphthalene, Phenanthrene, Biphenyl, and Their Derivatives in Interaction with and Oxidation by Cytochromes P450 2A13 and 2A6.

Authors:  Tsutomu Shimada; Shigeo Takenaka; Kensaku Kakimoto; Norie Murayama; Young-Ran Lim; Donghak Kim; Maryam K Foroozesh; Hiroshi Yamazaki; F Peter Guengerich; Masayuki Komori
Journal:  Chem Res Toxicol       Date:  2016-05-12       Impact factor: 3.739

10.  Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.

Authors:  Aaron G Bart; Kurt L Harris; Elizabeth M J Gillam; Emily E Scott
Journal:  J Biol Chem       Date:  2020-03-10       Impact factor: 5.157

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