Literature DB >> 19560420

Allosteric activation of E2-RING finger-mediated ubiquitylation by a structurally defined specific E2-binding region of gp78.

Ranabir Das1, Jennifer Mariano, Yien Che Tsai, Ravi C Kalathur, Zlatka Kostova, Jess Li, Sergey G Tarasov, Robert L McFeeters, Amanda S Altieri, Xinhua Ji, R Andrew Byrd, Allan M Weissman.   

Abstract

The activity of RING finger ubiquitin ligases (E3) is dependent on their ability to facilitate transfer of ubiquitin from ubiquitin-conjugating enzymes (E2) to substrates. The G2BR domain within the E3 gp78 binds selectively and with high affinity to the E2 Ube2g2. Through structural and functional analyses, we determine that this occurs on a region of Ube2g2 distinct from binding sites for ubiquitin-activating enzyme (E1) and RING fingers. Binding to the G2BR results in conformational changes in Ube2g2 that affect ubiquitin loading. The Ube2g2:G2BR interaction also causes an approximately 50-fold increase in affinity between the E2 and RING finger. This results in markedly increased ubiquitylation by Ube2g2 and the gp78 RING finger. The significance of this G2BR effect is underscored by enhanced ubiquitylation observed when Ube2g2 is paired with other RING finger E3s. These findings uncover a mechanism whereby allosteric effects on an E2 enhance E2-RING finger interactions and, consequently, ubiquitylation.

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Year:  2009        PMID: 19560420      PMCID: PMC3050579          DOI: 10.1016/j.molcel.2009.05.010

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  40 in total

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Authors:  L Deng; C Wang; E Spencer; L Yang; A Braun; J You; C Slaughter; C Pickart; Z J Chen
Journal:  Cell       Date:  2000-10-13       Impact factor: 41.582

2.  Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases.

Authors:  N Zheng; P Wang; P D Jeffrey; N P Pavletich
Journal:  Cell       Date:  2000-08-18       Impact factor: 41.582

3.  Binding and recognition in the assembly of an active BRCA1/BARD1 ubiquitin-ligase complex.

Authors:  Peter S Brzovic; Jennifer R Keeffe; Hiroyuki Nishikawa; Keiko Miyamoto; David Fox; Mamoru Fukuda; Tomohiko Ohta; Rachel Klevit
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-05       Impact factor: 11.205

4.  Recruitment of the p97 ATPase and ubiquitin ligases to the site of retrotranslocation at the endoplasmic reticulum membrane.

Authors:  Yihong Ye; Yoko Shibata; Marjolein Kikkert; Sjaak van Voorden; Emmanuel Wiertz; Tom A Rapoport
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-26       Impact factor: 11.205

5.  Crystal structure of the human ubiquitin conjugating enzyme complex, hMms2-hUbc13.

Authors:  T F Moraes; R A Edwards; S McKenna; L Pastushok; W Xiao; J N Glover; M J Ellison
Journal:  Nat Struct Biol       Date:  2001-08

6.  The tumor autocrine motility factor receptor, gp78, is a ubiquitin protein ligase implicated in degradation from the endoplasmic reticulum.

Authors:  S Fang; M Ferrone; C Yang; J P Jensen; S Tiwari; A M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

7.  Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.

Authors:  K S Hamilton; M J Ellison; K R Barber; R S Williams; J T Huzil; S McKenna; C Ptak; M Glover; G S Shaw
Journal:  Structure       Date:  2001-10       Impact factor: 5.006

8.  The Nedd8-conjugated ROC1-CUL1 core ubiquitin ligase utilizes Nedd8 charged surface residues for efficient polyubiquitin chain assembly catalyzed by Cdc34.

Authors:  Kenneth Wu; Angus Chen; Peilin Tan; Zhen-Qiang Pan
Journal:  J Biol Chem       Date:  2001-10-23       Impact factor: 5.157

9.  A novel mammalian endoplasmic reticulum ubiquitin ligase homologous to the yeast Hrd1.

Authors:  Eran Nadav; Ayelet Shmueli; Haim Barr; Hedva Gonen; Aaron Ciechanover; Yuval Reiss
Journal:  Biochem Biophys Res Commun       Date:  2003-03-28       Impact factor: 3.575

10.  Human HRD1 is an E3 ubiquitin ligase involved in degradation of proteins from the endoplasmic reticulum.

Authors:  Marjolein Kikkert; Ram Doolman; Min Dai; Rachel Avner; Gerco Hassink; Sjaak van Voorden; Swapna Thanedar; Joseph Roitelman; Vincent Chau; Emmanuel Wiertz
Journal:  J Biol Chem       Date:  2003-10-30       Impact factor: 5.157

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  97 in total

1.  Insights into ubiquitin-conjugating enzyme/ co-activator interactions from the structure of the Pex4p:Pex22p complex.

Authors:  Chris Williams; Marlene van den Berg; Santosh Panjikar; Will A Stanley; Ben Distel; Matthias Wilmanns
Journal:  EMBO J       Date:  2011-11-15       Impact factor: 11.598

Review 2.  Twists and turns in ubiquitin-like protein conjugation cascades.

Authors:  Brenda A Schulman
Journal:  Protein Sci       Date:  2011-11-09       Impact factor: 6.725

3.  Crystal structures of two bacterial HECT-like E3 ligases in complex with a human E2 reveal atomic details of pathogen-host interactions.

Authors:  David Yin-wei Lin; Jianbo Diao; Jue Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

Review 4.  HECT and RING finger families of E3 ubiquitin ligases at a glance.

Authors:  Meredith B Metzger; Ventzislava A Hristova; Allan M Weissman
Journal:  J Cell Sci       Date:  2012-02-01       Impact factor: 5.285

5.  Turning the RING domain protein MdmX into an active ubiquitin-protein ligase.

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Journal:  J Biol Chem       Date:  2010-08-12       Impact factor: 5.157

6.  Mechanism of polyubiquitin chain recognition by the human ubiquitin conjugating enzyme Ube2g2.

Authors:  William E Bocik; Aroop Sircar; Jeffrey J Gray; Joel R Tolman
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

Review 7.  Structural and functional insights to ubiquitin-like protein conjugation.

Authors:  Frederick C Streich; Christopher D Lima
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

Review 8.  Ubiquitin-dependent protein degradation at the endoplasmic reticulum and nuclear envelope.

Authors:  Adrian B Mehrtash; Mark Hochstrasser
Journal:  Semin Cell Dev Biol       Date:  2018-10-09       Impact factor: 7.727

9.  Conformational Dynamics and Allostery in E2:E3 Interactions Drive Ubiquitination: gp78 and Ube2g2.

Authors:  Kalyan S Chakrabarti; Jess Li; Ranabir Das; R Andrew Byrd
Journal:  Structure       Date:  2017-04-20       Impact factor: 5.006

10.  Solution structure and dynamics of human ubiquitin conjugating enzyme Ube2g2.

Authors:  Tingting Ju; William Bocik; Ananya Majumdar; Joel R Tolman
Journal:  Proteins       Date:  2010-04
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