Literature DB >> 19558424

Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest.

M Öpik1,2, M Metsis3,4, T J Daniell2, M Zobel1, M Moora1.   

Abstract

* Knowledge of the diversity of arbuscular mycorrhizal fungi (AMF) in natural ecosystems is a major bottleneck in mycorrhizal ecology. Here, we aimed to apply 454 sequencing--providing a new level of descriptive power--to assess the AMF diversity in a boreonemoral forest. * 454 sequencing reads of the small subunit ribosomal RNA (SSU rRNA) gene of Glomeromycota were assigned to sequence groups by blast searches against a custom-made annotated sequence database. * We detected 47 AMF taxa in the roots of 10 plant species in a 10 x 10 m plot, which is almost the same as the number of plant species in the whole studied forest. There was a significant difference between AMF communities in the roots of forest specialist plant species and in the roots of habitat generalist plant species. Forest plant species hosted 22 specialist AMF taxa, and the generalist plants shared all but one AMF taxon with forest plants, including globally distributed generalist fungi. These AMF taxa that have been globally recorded only in forest ecosystems were significantly over-represented in the roots of forest plant species. * Our findings suggest that partner specificity in AM symbiosis may occur at the level of ecological groups, rather than at the species level, of both plant and fungal partners.

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Year:  2009        PMID: 19558424     DOI: 10.1111/j.1469-8137.2009.02920.x

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  86 in total

1.  Comparison of morphological and molecular genetic quantification of relative abundance of arbuscular mycorrhizal fungi within roots.

Authors:  P Shi; L K Abbott; N C Banning; B Zhao
Journal:  Mycorrhiza       Date:  2012-01-10       Impact factor: 3.387

2.  Relatedness among arbuscular mycorrhizal fungi drives plant growth and intraspecific fungal coexistence.

Authors:  Aurélien Roger; Alexandre Colard; Caroline Angelard; Ian R Sanders
Journal:  ISME J       Date:  2013-07-04       Impact factor: 10.302

3.  Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi.

Authors:  Martti Vasar; Reidar Andreson; John Davison; Teele Jairus; Mari Moora; Maido Remm; J P W Young; Martin Zobel; Maarja Öpik
Journal:  Mycorrhiza       Date:  2017-07-20       Impact factor: 3.387

4.  Linking the community structure of arbuscular mycorrhizal fungi and plants: a story of interdependence?

Authors:  Sebastian Horn; Stefan Hempel; Erik Verbruggen; Matthias C Rillig; Tancredi Caruso
Journal:  ISME J       Date:  2017-02-28       Impact factor: 10.302

5.  Large elevation and small host plant differences in the arbuscular mycorrhizal communities of montane and alpine grasslands on the Tibetan Plateau.

Authors:  Xiaoliang Li; Meng Xu; Peter Christie; Xiaolin Li; Junling Zhang
Journal:  Mycorrhiza       Date:  2018-06-30       Impact factor: 3.387

6.  Testing potential effects of maize expressing the Bacillus thuringiensis Cry1Ab endotoxin (Bt maize) on mycorrhizal fungal communities via DNA- and RNA-based pyrosequencing and molecular fingerprinting.

Authors:  Erik Verbruggen; Eiko E Kuramae; Remy Hillekens; Mattias de Hollander; E Toby Kiers; Wilfred F M Röling; George A Kowalchuk; Marcel G A van der Heijden
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

7.  Global sampling of plant roots expands the described molecular diversity of arbuscular mycorrhizal fungi.

Authors:  Maarja Öpik; Martin Zobel; Juan J Cantero; John Davison; José M Facelli; Inga Hiiesalu; Teele Jairus; Jesse M Kalwij; Kadri Koorem; Miguel E Leal; Jaan Liira; Madis Metsis; Valentina Neshataeva; Jaanus Paal; Cherdchai Phosri; Sergei Põlme; Ülle Reier; Ülle Saks; Heidy Schimann; Odile Thiéry; Martti Vasar; Mari Moora
Journal:  Mycorrhiza       Date:  2013-02-20       Impact factor: 3.387

8.  Analysis of black fungal biofilms occurring at domestic water taps. I: compositional analysis using Tag-Encoded FLX Amplicon Pyrosequencing.

Authors:  Guido Heinrichs; Iris Hübner; Carsten K Schmidt; G Sybren de Hoog; Gerhard Haase
Journal:  Mycopathologia       Date:  2013-02-06       Impact factor: 2.574

9.  The role of local environment and geographical distance in determining community composition of arbuscular mycorrhizal fungi at the landscape scale.

Authors:  Christina Hazard; Paul Gosling; Christopher J van der Gast; Derek T Mitchell; Fiona M Doohan; Gary D Bending
Journal:  ISME J       Date:  2012-10-25       Impact factor: 10.302

10.  Diversity of root-associated arbuscular mycorrhizal fungal communities in a rubber tree plantation chronosequence in Northeast Thailand.

Authors:  Laetitia Herrmann; Didier Lesueur; Lambert Bräu; John Davison; Teele Jairus; Henri Robain; Agnès Robin; Martti Vasar; Wanpen Wiriyakitnateekul; Maarja Öpik
Journal:  Mycorrhiza       Date:  2016-07-23       Impact factor: 3.387

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