Literature DB >> 19551169

Mass spectrometry: from proteomics to metabolomics and lipidomics.

William J Griffiths1, Yuqin Wang.   

Abstract

Mass spectrometry (MS) in combination with liquid chromatography (LC), i.e. LC-MS, is the key analytical technique on which the emerging "omics" technologies of proteomics, metabolomics and lipidomics are based. It provides both structural and quantitative data and can be used in a "global" or "targeted" manner allowing on the one hand the identification of thousands of proteins from a tissue, or on the other the detection of biologically active metabolites at levels of a few parts-per-billion. It can be expected that the continued incremental developments in LC-MS along with data-handling routines will soon bear fruit in the quest for a greater understanding of human disease, leading to new drug targets and therapies. This tutorial review on proteomics, metabolomics and lipidomics will be of interest to the biochemical, biomedical and pharmaceutical communities, as well as those working in other branches of analytical bioscience.

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Year:  2009        PMID: 19551169     DOI: 10.1039/b618553n

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  53 in total

1.  Human plasma lipidome is pleiotropically associated with cardiovascular risk factors and death.

Authors:  Claire Bellis; Hemant Kulkarni; Manju Mamtani; Jack W Kent; Gerard Wong; Jacquelyn M Weir; Christopher K Barlow; Vincent Diego; Marcio Almeida; Thomas D Dyer; Harald H H Göring; Laura Almasy; Michael C Mahaney; Anthony G Comuzzie; Sarah Williams-Blangero; Peter J Meikle; John Blangero; Joanne E Curran
Journal:  Circ Cardiovasc Genet       Date:  2014-11-02

2.  msCompare: a framework for quantitative analysis of label-free LC-MS data for comparative candidate biomarker studies.

Authors:  Berend Hoekman; Rainer Breitling; Frank Suits; Rainer Bischoff; Peter Horvatovich
Journal:  Mol Cell Proteomics       Date:  2012-02-07       Impact factor: 5.911

3.  Parallel detection in a single ICR cell: Spectral averaging and improved S/N without increased acquisition time.

Authors:  Sung-Gun Park; Gordon A Anderson; James E Bruce
Journal:  Int J Mass Spectrom       Date:  2017-09-08       Impact factor: 1.986

4.  High-throughput database search and large-scale negative polarity liquid chromatography-tandem mass spectrometry with ultraviolet photodissociation for complex proteomic samples.

Authors:  James A Madsen; Hua Xu; Michelle R Robinson; Andrew P Horton; Jared B Shaw; David K Giles; Tamer S Kaoud; Kevin N Dalby; M Stephen Trent; Jennifer S Brodbelt
Journal:  Mol Cell Proteomics       Date:  2013-05-21       Impact factor: 5.911

Review 5.  Multi-dimensional mass spectrometry-based shotgun lipidomics and novel strategies for lipidomic analyses.

Authors:  Xianlin Han; Kui Yang; Richard W Gross
Journal:  Mass Spectrom Rev       Date:  2011-07-13       Impact factor: 10.946

Review 6.  Shotgun lipidomics on high resolution mass spectrometers.

Authors:  Dominik Schwudke; Kai Schuhmann; Ronny Herzog; Stefan R Bornstein; Andrej Shevchenko
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-09-01       Impact factor: 10.005

Review 7.  Lipid imaging with time-of-flight secondary ion mass spectrometry (ToF-SIMS).

Authors:  Melissa K Passarelli; Nicholas Winograd
Journal:  Biochim Biophys Acta       Date:  2011-05-27

8.  Dietary docosahexaenoic acid supplementation alters select physiological endocannabinoid-system metabolites in brain and plasma.

Authors:  Jodianne T Wood; John S Williams; Lakshmipathi Pandarinathan; David R Janero; Carol J Lammi-Keefe; Alexandros Makriyannis
Journal:  J Lipid Res       Date:  2010-01-13       Impact factor: 5.922

9.  "Flow valve" microfluidic devices for simple, detectorless, and label-free analyte quantitation.

Authors:  Debolina Chatterjee; Danielle S Mansfield; Neil G Anderson; Sudeep Subedi; Adam T Woolley
Journal:  Anal Chem       Date:  2012-08-10       Impact factor: 6.986

Review 10.  Proteomics and metabolomics in renal transplantation-quo vadis?

Authors:  Rahul Bohra; Jacek Klepacki; Jelena Klawitter; Jost Klawitter; Joshua M Thurman; Uwe Christians
Journal:  Transpl Int       Date:  2012-11-21       Impact factor: 3.782

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