Literature DB >> 19543230

The role of nuclear pores in gene regulation, development and disease.

Maya Capelson1, Martin W Hetzer.   

Abstract

Nuclear-pore complexes (NPCs) are large protein channels that span the nuclear envelope (NE), which is a double membrane that encloses the nuclear genome of eukaryotes. Each of the typically 2,000-4,000 pores in the NE of vertebrate cells is composed of multiple copies of 30 different proteins known as nucleoporins. The evolutionarily conserved NPC proteins have the well-characterized function of mediating the transport of molecules between the nucleoplasm and the cytoplasm. Mutations in nucleoporins are often linked to specific developmental defects and disease, and the resulting phenotypes are usually interpreted as the consequences of perturbed nuclear transport activity. However, recent evidence suggests that NPCs have additional functions in chromatin organization and gene regulation, some of which might be independent of nuclear transport. Here, we review the transport-dependent and transport-independent roles of NPCs in the regulation of nuclear function and gene expression.

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Year:  2009        PMID: 19543230      PMCID: PMC2727434          DOI: 10.1038/embor.2009.147

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  88 in total

1.  Distinct functional domains within nucleoporins Nup153 and Nup98 mediate transcription-dependent mobility.

Authors:  Eric R Griffis; Branch Craige; Christian Dimaano; Katharine S Ullman; Maureen A Powers
Journal:  Mol Biol Cell       Date:  2004-01-12       Impact factor: 4.138

2.  Minimal nuclear pore complexes define FG repeat domains essential for transport.

Authors:  Lisa A Strawn; Tianxiang Shen; Nataliya Shulga; David S Goldfarb; Susan R Wente
Journal:  Nat Cell Biol       Date:  2004-02-22       Impact factor: 28.824

Review 3.  The nuclear pore complex: a jack of all trades?

Authors:  Birthe Fahrenkrog; Joachim Köser; Ueli Aebi
Journal:  Trends Biochem Sci       Date:  2004-04       Impact factor: 13.807

4.  Kinase activation and transformation by NUP214-ABL1 is dependent on the context of the nuclear pore.

Authors:  Kim De Keersmaecker; Jennifer L Rocnik; Rafael Bernad; Benjamin H Lee; Dena Leeman; Olga Gielen; Hanne Verachtert; Cedric Folens; Sebastian Munck; Peter Marynen; Maarten Fornerod; D Gary Gilliland; Jan Cools
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

Review 5.  Structure, dynamics and function of nuclear pore complexes.

Authors:  Maximiliano A D'Angelo; Martin W Hetzer
Journal:  Trends Cell Biol       Date:  2008-09-09       Impact factor: 20.808

6.  The oncogene Nup98-HOXA9 induces gene transcription in myeloid cells.

Authors:  Ghada Ghannam; Akiko Takeda; Troy Camarata; Malcolm A Moore; Agnes Viale; Nabeel R Yaseen
Journal:  J Biol Chem       Date:  2003-10-15       Impact factor: 5.157

7.  Nuclear pore composition regulates neural stem/progenitor cell differentiation in the mouse embryo.

Authors:  Floria Lupu; Annabelle Alves; Kathryn Anderson; Valérie Doye; Elizabeth Lacy
Journal:  Dev Cell       Date:  2008-06       Impact factor: 12.270

8.  Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery.

Authors:  Susana Rodríguez-Navarro; Tamás Fischer; Ming-Juan Luo; Oreto Antúnez; Susanne Brettschneider; Johannes Lechner; Jose E Pérez-Ortín; Robin Reed; Ed Hurt
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

9.  Global histone acetylation induces functional genomic reorganization at mammalian nuclear pore complexes.

Authors:  Christopher R Brown; Caleb J Kennedy; Valerie A Delmar; Douglass J Forbes; Pamela A Silver
Journal:  Genes Dev       Date:  2008-03-01       Impact factor: 11.361

10.  The nuclear exosome and adenylation regulate posttranscriptional tethering of yeast GAL genes to the nuclear periphery.

Authors:  Sadanand Vodala; Katharine Compton Abruzzi; Michael Rosbash
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

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  61 in total

1.  Nuclear translocation of anamorsin during drug-induced dopaminergic neurodegeneration in culture and in rat brain.

Authors:  Kyung-Ah Park; Nuri Yun; Dong-Ik Shin; So Yoen Choi; Hyun Kim; Won-Ki Kim; Yuzuru Kanakura; Hirohiko Shibayama; Young J Oh
Journal:  J Neural Transm (Vienna)       Date:  2010-10-06       Impact factor: 3.575

2.  The Arabidopsis nuclear pore and nuclear envelope.

Authors:  Iris Meier; Jelena Brkljacic
Journal:  Arabidopsis Book       Date:  2010-10-07

Review 3.  Dynamics of the plant nuclear envelope and nuclear pore.

Authors:  Joanna Boruc; Xiao Zhou; Iris Meier
Journal:  Plant Physiol       Date:  2011-09-26       Impact factor: 8.340

4.  The C. elegans homolog of nucleoporin Nup98 is required for the integrity and function of germline P granules.

Authors:  Ekaterina Voronina; Geraldine Seydoux
Journal:  Development       Date:  2010-03-24       Impact factor: 6.868

5.  Introgression of Drosophila simulans nuclear pore protein 160 in Drosophila melanogaster alone does not cause inviability but does cause female sterility.

Authors:  Kyoichi Sawamura; Kazunori Maehara; Shotaro Mashino; Tatsuo Kagesawa; Miyuki Kajiwara; Kenji Matsuno; Aya Takahashi; Toshiyuki Takano-Shimizu
Journal:  Genetics       Date:  2010-07-20       Impact factor: 4.562

Review 6.  Functional interactions between nucleoporins and chromatin.

Authors:  Yun Liang; Martin W Hetzer
Journal:  Curr Opin Cell Biol       Date:  2010-10-26       Impact factor: 8.382

Review 7.  Nuclear transport of galectin-3 and its therapeutic implications.

Authors:  Tatsuyoshi Funasaka; Avraham Raz; Pratima Nangia-Makker
Journal:  Semin Cancer Biol       Date:  2014-03-19       Impact factor: 15.707

8.  Structure of a trimeric nucleoporin complex reveals alternate oligomerization states.

Authors:  Vivien Nagy; Kuo-Chiang Hsia; Erik W Debler; Martin Kampmann; Andrew M Davenport; Günter Blobel; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-01       Impact factor: 11.205

9.  Nuclear pores protect genome integrity by assembling a premitotic and Mad1-dependent anaphase inhibitor.

Authors:  Veronica Rodriguez-Bravo; John Maciejowski; Jennifer Corona; Håkon Kirkeby Buch; Philippe Collin; Masato T Kanemaki; Jagesh V Shah; Prasad V Jallepalli
Journal:  Cell       Date:  2014-02-27       Impact factor: 41.582

Review 10.  Aiding and abetting cancer: mRNA export and the nuclear pore.

Authors:  Biljana Culjkovic-Kraljacic; Katherine L B Borden
Journal:  Trends Cell Biol       Date:  2013-04-10       Impact factor: 20.808

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