Literature DB >> 19540931

Molecular characterization of hypoxia inducible factor-1 (HIF-1) from the white shrimp Litopenaeus vannamei and tissue-specific expression under hypoxia.

José G Soñanez-Organis1, Alma B Peregrino-Uriarte, Silvia Gómez-Jiménez, Alonso López-Zavala, Henry Jay Forman, Gloria Yepiz-Plascencia.   

Abstract

Hypoxia inducible factor 1 (HIF-1) is a key transcription factor that regulates a variety of molecular responses to hypoxia. Some marine crustaceans experience changes of oxygen tension in their aquatic environment, but knowledge about the function and expression of HIF-1 is very limited. HIF-1 is a heterodimer composed by alpha and beta subunits. We report the complete cDNA sequences of HIF-1alpha and HIF-1beta from the white shrimp Litopenaeus vannamei. HIF-1alpha (LvHIF-1alpha) is 3672bp and codes for 1050 amino acids, while HIF-1beta is 2135bp (LvHIF-1beta) and 608 amino acids. Both, the alpha and beta subunits have the helix-loop-helix (bHLH) and PAS domains. HIF-1alpha also has the oxygen dependent degradation (ODD) and the C-terminal transactivation domain (C-TAD), important for regulation in normoxia. Phylogenetic analyses of the proteins indicate separation of invertebrates from vertebrates. Large differences of HIF-1alpha and HIF-1beta transcripts abundance were detected in gills, hepatopancreas and muscle under normoxia (6mg/L dissolved oxygen, DO) and hypoxia (2.5 and 1.5mg/L DO). HIF-1alpha was more abundant in gills and HIF-1beta in hepatopancreas. Large changes in response to hypoxia were detected for HIF-1alpha in gills, while HIF-1beta remained fairly constant. Glucose and lactate in hemolymph increased rapidly in hypoxia in all cases and up to 4.7 and 5.0-fold, respectively, in response to 1.5mg/L DO for 1h.

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Year:  2009        PMID: 19540931     DOI: 10.1016/j.cbpc.2009.06.005

Source DB:  PubMed          Journal:  Comp Biochem Physiol C Toxicol Pharmacol        ISSN: 1532-0456            Impact factor:   3.228


  17 in total

1.  Assessment of hypoxia-inducible factor-1α mRNA expression in mantis shrimp as a biomarker of environmental hypoxia exposure.

Authors:  Keita Kodama; Md Saydur Rahman; Toshihiro Horiguchi; Peter Thomas
Journal:  Biol Lett       Date:  2011-10-26       Impact factor: 3.703

2.  Hypoxia-Inducible Factor α and Hif-prolyl Hydroxylase Characterization and Gene Expression in Short-Time Air-Exposed Mytilus galloprovincialis.

Authors:  Alessia Giannetto; Maria Maisano; Tiziana Cappello; Sabrina Oliva; Vincenzo Parrino; Antonino Natalotto; Giuseppe De Marco; Chiara Barberi; Orazio Romeo; Angela Mauceri; Salvatore Fasulo
Journal:  Mar Biotechnol (NY)       Date:  2015-08-16       Impact factor: 3.619

3.  Molecular characterization and mRNA expression of two key enzymes of hypoxia-sensing pathways in eastern oysters Crassostrea virginica (Gmelin): hypoxia-inducible factor α (HIF-α) and HIF-prolyl hydroxylase (PHD).

Authors:  Helen Piontkivska; J Sook Chung; Anna V Ivanina; Eugene P Sokolov; Sirinart Techa; Inna M Sokolova
Journal:  Comp Biochem Physiol Part D Genomics Proteomics       Date:  2010-10-30       Impact factor: 2.674

4.  Catalytic subunits atpα and atpβ from the Pacific white shrimp Litopenaeus vannamei F(O)F (1) ATP-synthase complex: cDNA sequences, phylogenies, and mRNA quantification during hypoxia.

Authors:  Oliviert Martinez-Cruz; Fernando Garcia-Carreño; Arlett Robles-Romo; Alejandro Varela-Romero; Adriana Muhlia-Almazan
Journal:  J Bioenerg Biomembr       Date:  2011-03-08       Impact factor: 2.945

5.  Prolonged fasting activates hypoxia inducible factors-1α, -2α and -3α in a tissue-specific manner in northern elephant seal pups.

Authors:  José G Soñanez-Organis; José P Vázquez-Medina; Daniel E Crocker; Rudy M Ortiz
Journal:  Gene       Date:  2013-05-22       Impact factor: 3.688

6.  The glucose transporter 1 -GLUT1- from the white shrimp Litopenaeus vannamei is up-regulated during hypoxia.

Authors:  José A Martínez-Quintana; Alma B Peregrino-Uriarte; Teresa Gollas-Galván; Silvia Gómez-Jiménez; Gloria Yepiz-Plascencia
Journal:  Mol Biol Rep       Date:  2014-08-29       Impact factor: 2.316

7.  Fine Mapping of the High-pH Tolerance and Growth Trait-Related Quantitative Trait Loci (QTLs) and Identification of the Candidate Genes in Pacific White Shrimp (Litopenaeus vannamei).

Authors:  Wen Huang; Chuhang Cheng; Jinshang Liu; Xin Zhang; Chunhua Ren; Xiao Jiang; Ting Chen; Kaimin Cheng; Huo Li; Chaoqun Hu
Journal:  Mar Biotechnol (NY)       Date:  2019-11-22       Impact factor: 3.619

8.  Gene expression and physiological changes of different populations of the long-lived bivalve Arctica islandica under low oxygen conditions.

Authors:  Eva E R Philipp; Wiebke Wessels; Heike Gruber; Julia Strahl; Anika E Wagner; Insa M A Ernst; Gerald Rimbach; Lars Kraemer; Stefan Schreiber; Doris Abele; Philip Rosenstiel
Journal:  PLoS One       Date:  2012-09-19       Impact factor: 3.240

9.  Transciptomic and histological analysis of hepatopancreas, muscle and gill tissues of oriental river prawn (Macrobrachium nipponense) in response to chronic hypoxia.

Authors:  Shengming Sun; Fujun Xuan; Hongtuo Fu; Jian Zhu; Xianping Ge; Zhimin Gu
Journal:  BMC Genomics       Date:  2015-07-03       Impact factor: 3.969

10.  Gene silencing in crustaceans: from basic research to biotechnologies.

Authors:  Amir Sagi; Rivka Manor; Tomer Ventura
Journal:  Genes (Basel)       Date:  2013-11-07       Impact factor: 4.096

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