Literature DB >> 19537943

Zebrafish development and genetics: introducing undergraduates to developmental biology and genetics in a large introductory laboratory class.

Allison D'Costa1, Iain T Shepherd.   

Abstract

We have taken advantage of the strengths of the zebrafish model system to introduce developmental biology and genetics to undergraduates in their second semester of the Introductory Biology course at Emory. We designed a 6-week laboratory module based on research being undertaken by faculty in the department, and incorporated experiments that used current research methods including bioinformatics. Students undertook a range of experiments including direct observation of live wild-type zebrafish at different stages of embryogenesis, whole-mount in situ hybridization of mutant and wild-type embryos, vital dye staining of mutant and wild-type embryos, and pharmacological treatments to perturb normal development. These laboratories engaged the students by providing a hands-on, research-centered experience, while also enhancing their written (worksheets and laboratory reports) and oral (group presentation) communication skills. We describe the proceedings of each lab and the logistics of preparing and running these labs for 400-500 students (120 students taking lab each day), and provide a preliminary assessment of the success of the laboratories data based on student evaluations.

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Year:  2009        PMID: 19537943      PMCID: PMC2774836          DOI: 10.1089/zeb.2008.0562

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  12 in total

Review 1.  The art and design of genetic screens: zebrafish.

Authors:  E E Patton; L I Zon
Journal:  Nat Rev Genet       Date:  2001-12       Impact factor: 53.242

2.  Education. Teaching in a research context.

Authors:  William B Wood; James M Gentile
Journal:  Science       Date:  2003-11-28       Impact factor: 47.728

Review 3.  Headwaters of the zebrafish -- emergence of a new model vertebrate.

Authors:  David Jonah Grunwald; Judith S Eisen
Journal:  Nat Rev Genet       Date:  2002-09       Impact factor: 53.242

4.  lessen encodes a zebrafish trap100 required for enteric nervous system development.

Authors:  Jacy Pietsch; Jean-Marie Delalande; Brett Jakaitis; James D Stensby; Sarah Dohle; William S Talbot; David W Raible; Iain T Shepherd
Journal:  Development       Date:  2006-01-05       Impact factor: 6.868

5.  Expression of snail2, a second member of the zebrafish snail family, in cephalic mesendoderm and presumptive neural crest of wild-type and spadetail mutant embryos.

Authors:  C Thisse; B Thisse; J H Postlethwait
Journal:  Dev Biol       Date:  1995-11       Impact factor: 3.582

6.  Stages of embryonic development of the zebrafish.

Authors:  C B Kimmel; W W Ballard; S R Kimmel; B Ullmann; T F Schilling
Journal:  Dev Dyn       Date:  1995-07       Impact factor: 3.780

7.  Tbx24, encoding a T-box protein, is mutated in the zebrafish somite-segmentation mutant fused somites.

Authors:  Masataka Nikaido; Atsushi Kawakami; Atsushi Sawada; Makoto Furutani-Seiki; Hiroyuki Takeda; Kazuo Araki
Journal:  Nat Genet       Date:  2002-05-20       Impact factor: 38.330

8.  Lithium perturbation and goosecoid expression identify a dorsal specification pathway in the pregastrula zebrafish.

Authors:  S E Stachel; D J Grunwald; P Z Myers
Journal:  Development       Date:  1993-04       Impact factor: 6.868

9.  The teratogenic Veratrum alkaloid cyclopamine inhibits sonic hedgehog signal transduction.

Authors:  J P Incardona; W Gaffield; R P Kapur; H Roelink
Journal:  Development       Date:  1998-09       Impact factor: 6.868

10.  Developmental regulation of zebrafish MyoD in wild-type, no tail and spadetail embryos.

Authors:  E S Weinberg; M L Allende; C S Kelly; A Abdelhamid; T Murakami; P Andermann; O G Doerre; D J Grunwald; B Riggleman
Journal:  Development       Date:  1996-01       Impact factor: 6.868

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  6 in total

Review 1.  Protective and pro-inflammatory roles of intestinal bacteria.

Authors:  Cynthia Reinoso Webb; Iurii Koboziev; Kathryn L Furr; Matthew B Grisham
Journal:  Pathophysiology       Date:  2016-02-17

2.  Using Zebrafish to Bring Hands-On Laboratory Experiences to Urban Classrooms.

Authors:  Rebecca Wilk; Naomi Ali; Samantha J England; Katharine E Lewis
Journal:  Zebrafish       Date:  2018-01-22       Impact factor: 1.985

3.  Zebrafish embryos as in vivo test tubes to unravel cell-specific mechanisms of neurogenesis during neurodevelopment and in diseases.

Authors:  Éric Samarut
Journal:  Neurogenesis (Austin)       Date:  2016-10-07

4.  Neuro- and Cardiovascular Activities of Montivipera bornmuelleri Snake Venom.

Authors:  Christina Sahyoun; Wojciech Krezel; César Mattei; Jean-Marc Sabatier; Christian Legros; Ziad Fajloun; Mohamad Rima
Journal:  Biology (Basel)       Date:  2022-06-09

5.  Implementation of a project-based molecular biology laboratory emphasizing protein structure-function relationships in a large introductory biology laboratory course.

Authors:  Daniel J Treacy; Saumya M Sankaran; Susannah Gordon-Messer; Danielle Saly; Rebecca Miller; Stefan R Isaac; Melissa S Kosinski-Collins
Journal:  CBE Life Sci Educ       Date:  2011       Impact factor: 3.325

6.  Using whole mount in situ hybridization to link molecular and organismal biology.

Authors:  Nicole L Jacobs; R Craig Albertson; Jason R Wiles
Journal:  J Vis Exp       Date:  2011-03-31       Impact factor: 1.355

  6 in total

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