Literature DB >> 19531662

Can phage display be used as a tool to functionally identify endogenous eat-me signals in phagocytosis?

Nora B Caberoy1, Yixiong Zhou, Wei Li.   

Abstract

Removal of apoptotic cells and cellular debris by phagocytosis is essential for development, tissue homeostasis, and resolution of inflammation. Eat-me signals control the initiation of phagocytosis, holding a key to the understanding of phagocyte biology. Because of a lack of functional cloning strategy, eat-me signals are conventionally identified and characterized on a case-by-case basis. The feasibility of functional cloning of eat-me signals by phage display is investigated by characterizing the biological behavior of T7 phages displaying 2 well-known eat-me signals: growth arrest-specific gene 6 (Gas6) and milk fat globule-EGF8 (MFG-E8). Gas6-phage binds to all 3 known Gas6 receptors: Mer, Axl, and Tyro3 receptor tyrosine kinases. Gas6-phage and MFG-E8-phage are capable of binding to phagocytes and nonphagocytes. However, both phages stimulate phage uptake only in phagocytes, including macrophages, microglia, and retinal pigment epithelium cells, but not in nonphagocytes. Furthermore, functional phage selection by phagocytosis in phagocytes enriches both Gas6-phage and MFG-E8-phage, suggesting that phage display can be used as a tool to functionally identify unknown eat-me signals from phage display cDNA library.

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Year:  2009        PMID: 19531662      PMCID: PMC3816984          DOI: 10.1177/1087057109335679

Source DB:  PubMed          Journal:  J Biomol Screen        ISSN: 1087-0571


  27 in total

Review 1.  Phagocytic removal of apoptotic spermatogenic cells by Sertoli cells: mechanisms and consequences.

Authors:  Yoshinobu Nakanishi; Akiko Shiratsuchi
Journal:  Biol Pharm Bull       Date:  2004-01       Impact factor: 2.233

Review 2.  Endocytosis and signal transduction: basic science update.

Authors:  Jiang Liu; Joseph I Shapiro
Journal:  Biol Res Nurs       Date:  2003-10       Impact factor: 2.522

Review 3.  Clearance of apoptotic cells: getting rid of the corpses.

Authors:  Kirsten Lauber; Sibylle G Blumenthal; Michaela Waibel; Sebastian Wesselborg
Journal:  Mol Cell       Date:  2004-05-07       Impact factor: 17.970

Review 4.  Immunobiology of the TAM receptors.

Authors:  Greg Lemke; Carla V Rothlin
Journal:  Nat Rev Immunol       Date:  2008-05       Impact factor: 53.106

5.  Identification of a factor that links apoptotic cells to phagocytes.

Authors:  Rikinari Hanayama; Masato Tanaka; Keiko Miwa; Azusa Shinohara; Akihiro Iwamatsu; Shigekazu Nagata
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

6.  Receptor-targeted gene delivery using multivalent phagemid particles.

Authors:  D Larocca; K Jensen-Pergakes; M A Burg; A Baird
Journal:  Mol Ther       Date:  2001-04       Impact factor: 11.454

7.  Neuroblastoma tumor cell-binding peptides identified through random peptide phage display.

Authors:  J Zhang; H Spring; M Schwab
Journal:  Cancer Lett       Date:  2001-10-10       Impact factor: 8.679

8.  Mutation of the receptor tyrosine kinase gene Mertk in the retinal dystrophic RCS rat.

Authors:  P M D'Cruz; D Yasumura; J Weir; M T Matthes; H Abderrahim; M M LaVail; D Vollrath
Journal:  Hum Mol Genet       Date:  2000-03-01       Impact factor: 6.150

9.  De novo identification of tumor-specific internalizing human antibody-receptor pairs by phage-display methods.

Authors:  Changshou Gao; Shenlan Mao; Francesca Ronca; Sufei Zhuang; Vito Quaranta; Peter Wirsching; Kim D Janda
Journal:  J Immunol Methods       Date:  2003-03-01       Impact factor: 2.303

Review 10.  The microglial phagocytic role with specific plaque types in the Alzheimer disease brain.

Authors:  Michael R D'Andrea; Gregory M Cole; March D Ard
Journal:  Neurobiol Aging       Date:  2004 May-Jun       Impact factor: 4.673

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  17 in total

1.  Tubby and tubby-like protein 1 are new MerTK ligands for phagocytosis.

Authors:  Nora B Caberoy; Yixiong Zhou; Wei Li
Journal:  EMBO J       Date:  2010-10-26       Impact factor: 11.598

2.  Unraveling the molecular mystery of retinal pigment epithelium phagocytosis.

Authors:  Nora B Caberoy; Wei Li
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

3.  Galectin-3 is a new MerTK-specific eat-me signal.

Authors:  Nora B Caberoy; Gabriela Alvarado; Jo-Lawrence Bigcas; Wei Li
Journal:  J Cell Physiol       Date:  2012-02       Impact factor: 6.384

4.  Function-first ligandomics for ocular vascular research and drug target discovery.

Authors:  Xin Rong; Hong Tian; Liu Yang; Wei Li
Journal:  Exp Eye Res       Date:  2019-03-21       Impact factor: 3.467

5.  Identification of tubby and tubby-like protein 1 as eat-me signals by phage display.

Authors:  Nora B Caberoy; Dony Maiguel; Youngbae Kim; Wei Li
Journal:  Exp Cell Res       Date:  2009-10-22       Impact factor: 3.905

Review 6.  New perspective for phage display as an efficient and versatile technology of functional proteomics.

Authors:  Wei Li; Nora B Caberoy
Journal:  Appl Microbiol Biotechnol       Date:  2009-10-14       Impact factor: 4.813

7.  Tubby regulates microglial phagocytosis through MerTK.

Authors:  Nora B Caberoy; Gabriela Alvarado; Wei Li
Journal:  J Neuroimmunol       Date:  2012-08-09       Impact factor: 3.478

8.  Efficient identification of tubby-binding proteins by an improved system of T7 phage display.

Authors:  Nora B Caberoy; Yixiong Zhou; Xiaoyu Jiang; Gabriela Alvarado; Wei Li
Journal:  J Mol Recognit       Date:  2010 Jan-Feb       Impact factor: 2.137

9.  Unconventional secretion of tubby and tubby-like protein 1.

Authors:  Nora B Caberoy; Wei Li
Journal:  FEBS Lett       Date:  2009-08-18       Impact factor: 4.124

10.  Mesd extrinsically promotes phagocytosis by retinal pigment epithelial cells.

Authors:  Xiuping Chen; Feiye Guo; Michelle E LeBlanc; Ying Ding; Chenming Zhang; Akhalesh Shakya; Wei Li
Journal:  Cell Biol Toxicol       Date:  2016-05-17       Impact factor: 6.691

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