Literature DB >> 19529687

The effect of integration time on fluctuation measurements: calibrating an optical trap in the presence of motion blur.

Wesley P Wong, Ken Halvorsen.   

Abstract

Dynamical instrument limitations, such as finite detection bandwidth, do not simply add statistical errors to fluctuation measurements, but can create significant systematic biases that affect the measurement of steady-state properties. Such effects must be considered when calibrating ultra-sensitive force probes by analyzing the observed Brownian fluctuations. In this article, we present a novel method for extracting the true spring constant and diffusion coefficient of a harmonically confined Brownian particle that extends the standard equipartition and power spectrum techniques to account for video-image motion blur. These results are confirmed both numerically with a Brownian dynamics simulation, and experimentally with laser optical tweezers.

Year:  2006        PMID: 19529687     DOI: 10.1364/oe.14.012517

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  38 in total

1.  Power spectrum and Allan variance methods for calibrating single-molecule video-tracking instruments.

Authors:  Bob M Lansdorp; Omar A Saleh
Journal:  Rev Sci Instrum       Date:  2012-02       Impact factor: 1.523

2.  Measuring the size and charge of single nanoscale objects in solution using an electrostatic fluidic trap.

Authors:  Nassiredin Mojarad; Madhavi Krishnan
Journal:  Nat Nanotechnol       Date:  2012-06-24       Impact factor: 39.213

3.  Quantitative guidelines for force calibration through spectral analysis of magnetic tweezers data.

Authors:  Aartjan J W te Velthuis; Jacob W J Kerssemakers; Jan Lipfert; Nynke H Dekker
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

4.  High Spatiotemporal-Resolution Magnetic Tweezers: Calibration and Applications for DNA Dynamics.

Authors:  David Dulin; Tao Ju Cui; Jelmer Cnossen; Margreet W Docter; Jan Lipfert; Nynke H Dekker
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

5.  Controlled photonic manipulation of proteins and other nanomaterials.

Authors:  Yih-Fan Chen; Xavier Serey; Rupa Sarkar; Peng Chen; David Erickson
Journal:  Nano Lett       Date:  2012-02-02       Impact factor: 11.189

6.  Tunable optical tweezers for wavelength-dependent measurements.

Authors:  Brooke Hester; Gretchen K Campbell; Carlos López-Mariscal; Carly Levin Filgueira; Ryan Huschka; Naomi J Halas; Kristian Helmerson
Journal:  Rev Sci Instrum       Date:  2012-04       Impact factor: 1.523

7.  Plasma membrane tension orchestrates membrane trafficking, cytoskeletal remodeling, and biochemical signaling during phagocytosis.

Authors:  Thomas A Masters; Bruno Pontes; Virgile Viasnoff; You Li; Nils C Gauthier
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-02       Impact factor: 11.205

8.  Following easy slope paths on a free energy landscape: the case study of the Trp-cage folding mechanism.

Authors:  Fabrizio Marinelli
Journal:  Biophys J       Date:  2013-09-03       Impact factor: 4.033

9.  HU protein induces incoherent DNA persistence length.

Authors:  Guy Nir; Moshe Lindner; Heidelinde R C Dietrich; Olga Girshevitz; Constantinos E Vorgias; Yuval Garini
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

10.  Trapping and rotating nanoparticles using a plasmonic nano-tweezer with an integrated heat sink.

Authors:  Kai Wang; Ethan Schonbrun; Paul Steinvurzel; Kenneth B Crozier
Journal:  Nat Commun       Date:  2011-09-13       Impact factor: 14.919

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