Literature DB >> 19525417

Cooperative regulation of ADE3 transcription by Gcn4p and Bas1p in Saccharomyces cerevisiae.

Yoo Jin Joo1, Jung-Ae Kim, Joung Hee Baek, Ki Moon Seong, Kyung-Duk Han, Jae Mahn Song, Jin Young Choi, Joon Kim.   

Abstract

The one-carbon response regulon is essential for the biosynthesis of nucleic acids as well as several amino acids. The ADE3 gene is known to encode a crucial one-carbon regulon enzyme, tetrahydrofolate synthase, which is involved in the biosynthesis of purine and the amino acids methionine and glycine. Therefore, the mechanism through which ADE3 transcription is regulated appears to be critical for the cross-talk among these metabolic pathways. Even so, the direct involvement of ADE3 transcription through gene-specific transcription factors has not been shown clearly. In this study, the promoter structure of the ADE3 gene was investigated in detail, and a genuine Gcn4p responsive element (GCRE) was confirmed among three putative GCRE elements in vivo and in vitro. Through gene deletion studies of Gcn4p and Bas1p, it was established that both factors are involved in the transcriptional regulation of the ADE3 gene. Direct binding to this GCRE and the occupancy of the ADE3 promoter by these factors were also confirmed. Taking these results together, we concluded that Gcn4p is responsible for the basal and inducible expression of the ADE3 gene, while Bas1p is required for its basal expression.

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Year:  2009        PMID: 19525417      PMCID: PMC2725562          DOI: 10.1128/EC.00116-09

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  44 in total

1.  Adaptability at the protein-DNA interface is an important aspect of sequence recognition by bZIP proteins.

Authors:  J Kim; D Tzamarias; T Ellenberger; S C Harrison; K Struhl
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-15       Impact factor: 11.205

2.  DNA-binding domain and recognition sequence of the yeast BAS1 protein, a divergent member of the Myb family of transcription factors.

Authors:  I Høvring; A Bostad; E Ording; A H Myrset; O S Gabrielsen
Journal:  J Biol Chem       Date:  1994-07-01       Impact factor: 5.157

3.  Activation of the ADE genes requires the chromatin remodeling complexes SAGA and SWI/SNF.

Authors:  Rebecca N Koehler; Nicole Rachfall; Ronda J Rolfes
Journal:  Eukaryot Cell       Date:  2007-06-15

4.  Regulation of the ADE2 gene from Saccharomyces cerevisiae.

Authors:  A Stotz; P P Müller; P Linder
Journal:  Curr Genet       Date:  1993-12       Impact factor: 3.886

5.  The UV response involving the Ras signaling pathway and AP-1 transcription factors is conserved between yeast and mammals.

Authors:  D Engelberg; C Klein; H Martinetto; K Struhl; M Karin
Journal:  Cell       Date:  1994-05-06       Impact factor: 41.582

6.  GCN4p activation of the yeast TRP3 gene is enhanced by ABF1p and uses a suboptimal TATA element.

Authors:  J A Martens; C J Brandl
Journal:  J Biol Chem       Date:  1994-06-03       Impact factor: 5.157

7.  Transcriptional activation of yeast nucleotide biosynthetic gene ADE4 by GCN4.

Authors:  H U Mösch; B Scheier; R Lahti; P Mäntsäla; G H Braus
Journal:  J Biol Chem       Date:  1991-10-25       Impact factor: 5.157

8.  Function of yeast cytoplasmic C1-tetrahydrofolate synthase.

Authors:  J M Song; J C Rabinowitz
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-01       Impact factor: 11.205

9.  Determinants of half-site spacing preferences that distinguish AP-1 and ATF/CREB bZIP domains.

Authors:  J Kim; K Struhl
Journal:  Nucleic Acids Res       Date:  1995-07-11       Impact factor: 16.971

10.  Nucleotide sequence and characterization of the Saccharomyces cerevisiae RPL19A gene encoding a homolog of the mammalian ribosomal protein L19.

Authors:  J M Song; E Cheung; J C Rabinowitz
Journal:  Yeast       Date:  1995-04-15       Impact factor: 3.239

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  5 in total

1.  Gcn4p-mediated transcriptional repression of ribosomal protein genes under amino-acid starvation.

Authors:  Yoo Jin Joo; Jin-Ha Kim; Un-Beom Kang; Myeong-Hee Yu; Joon Kim
Journal:  EMBO J       Date:  2010-12-24       Impact factor: 11.598

2.  Gene coexpression measures in large heterogeneous samples using count statistics.

Authors:  Y X Rachel Wang; Michael S Waterman; Haiyan Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-06       Impact factor: 11.205

3.  Dissection of the PHO pathway in Schizosaccharomyces pombe using epistasis and the alternate repressor adenine.

Authors:  Molly Estill; Christine L Kerwin-Iosue; Dennis D Wykoff
Journal:  Curr Genet       Date:  2014-12-30       Impact factor: 3.886

4.  Selection markers for transformation of the sequenced reference monokaryon Okayama 7/#130 and homokaryon AmutBmut of Coprinopsis cinerea.

Authors:  Bastian Dörnte; Can Peng; Zemin Fang; Aysha Kamran; Cut Yulvizar; Ursula Kües
Journal:  Fungal Biol Biotechnol       Date:  2020-10-12

5.  The identification of putative RNA polymerase II C-terminal domain associated proteins in red and green algae.

Authors:  Chunlin Yang; Paul W Hager; John W Stiller
Journal:  Transcription       Date:  2014-12-10
  5 in total

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