Literature DB >> 19522756

Structural mechanisms for regulation of membrane traffic by rab GTPases.

Meng-Tse Gabe Lee1, Ashwini Mishra, David G Lambright.   

Abstract

In all eukaryotic organisms, Rab GTPases function as critical regulators of membrane traffic, organelle biogenesis and maturation, and related cellular processes. The numerous Rab proteins have distinctive yet overlapping subcellular distributions throughout the endomembrane system. Intensive investigation has clarified the underlying molecular and structural mechanisms for several ubiquitous Rab proteins that control membrane traffic between tubular-vesicular organelles in the exocytic, endocytic and recycling pathways. In this review, we focus on structural insights that inform our current understanding of the organization of the Rab family as well as the mechanisms for membrane targeting and activation, interaction with effectors, deactivation and specificity determination.

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Year:  2009        PMID: 19522756      PMCID: PMC4784978          DOI: 10.1111/j.1600-0854.2009.00942.x

Source DB:  PubMed          Journal:  Traffic        ISSN: 1398-9219            Impact factor:   6.215


  116 in total

Review 1.  Rab proteins as membrane organizers.

Authors:  M Zerial; H McBride
Journal:  Nat Rev Mol Cell Biol       Date:  2001-02       Impact factor: 94.444

Review 2.  Ypt and Rab GTPases: insight into functions through novel interactions.

Authors:  N Segev
Journal:  Curr Opin Cell Biol       Date:  2001-08       Impact factor: 8.382

Review 3.  Exchange factors, effectors, GAPs and motor proteins: common thermodynamic and kinetic principles for different functions.

Authors:  Roger S Goody; Waltraud Hofmann-Goody
Journal:  Eur Biophys J       Date:  2002-06-21       Impact factor: 1.733

4.  Structural basis for Rab11-mediated recruitment of FIP3 to recycling endosomes.

Authors:  Sudharshan Eathiraj; Ashwini Mishra; Rytis Prekeris; David G Lambright
Journal:  J Mol Biol       Date:  2006-08-26       Impact factor: 5.469

5.  First crystallographic models of human TBC domains in the context of a family-wide structural analysis.

Authors:  Wolfram Tempel; Yufeng Tong; Svetoslav Dimov; Alexey Bochkarev; Heewon Park
Journal:  Proteins       Date:  2008-04

6.  Mss4 does not function as an exchange factor for Rab in endoplasmic reticulum to Golgi transport.

Authors:  C Nuoffer; S K Wu; C Dascher; W E Balch
Journal:  Mol Biol Cell       Date:  1997-07       Impact factor: 4.138

7.  TBC domain family, member 15 is a novel mammalian Rab GTPase-activating protein with substrate preference for Rab7.

Authors:  Xiang-Ming Zhang; Bong Walsh; Christina A Mitchell; Tony Rowe
Journal:  Biochem Biophys Res Commun       Date:  2005-09-16       Impact factor: 3.575

8.  Legionella pneumophila proteins that regulate Rab1 membrane cycling.

Authors:  Alyssa Ingmundson; Anna Delprato; David G Lambright; Craig R Roy
Journal:  Nature       Date:  2007-10-21       Impact factor: 49.962

9.  The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes.

Authors:  Yiying Cai; Harvey F Chin; Darina Lazarova; Shekar Menon; Chunmei Fu; Huaqing Cai; Anthony Sclafani; David W Rodgers; Enrique M De La Cruz; Susan Ferro-Novick; Karin M Reinisch
Journal:  Cell       Date:  2008-06-27       Impact factor: 41.582

10.  The Rap-RapGAP complex: GTP hydrolysis without catalytic glutamine and arginine residues.

Authors:  Andrea Scrima; Christoph Thomas; Delia Deaconescu; Alfred Wittinghofer
Journal:  EMBO J       Date:  2008-02-28       Impact factor: 11.598

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  57 in total

1.  Insights regarding guanine nucleotide exchange from the structure of a DENN-domain protein complexed with its Rab GTPase substrate.

Authors:  Xudong Wu; Michael J Bradley; Yiying Cai; Daniel Kümmel; Enrique M De La Cruz; Francis A Barr; Karin M Reinisch
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  Assembly of the biogenesis of lysosome-related organelles complex-3 (BLOC-3) and its interaction with Rab9.

Authors:  Daniel P Kloer; Raul Rojas; Viorica Ivan; Kengo Moriyama; Thijs van Vlijmen; Namita Murthy; Rodolfo Ghirlando; Peter van der Sluijs; James H Hurley; Juan S Bonifacino
Journal:  J Biol Chem       Date:  2010-01-04       Impact factor: 5.157

Review 3.  DENN domain proteins: regulators of Rab GTPases.

Authors:  Andrea L Marat; Hatem Dokainish; Peter S McPherson
Journal:  J Biol Chem       Date:  2011-02-17       Impact factor: 5.157

Review 4.  Role of Rab GTPases in membrane traffic and cell physiology.

Authors:  Alex H Hutagalung; Peter J Novick
Journal:  Physiol Rev       Date:  2011-01       Impact factor: 37.312

Review 5.  Exploring protein lipidation with chemical biology.

Authors:  Howard C Hang; Maurine E Linder
Journal:  Chem Rev       Date:  2011-09-16       Impact factor: 60.622

6.  The evolutionary landscape of the Rab family in chordates.

Authors:  Ugo Coppola; Filomena Ristoratore; Ricard Albalat; Salvatore D'Aniello
Journal:  Cell Mol Life Sci       Date:  2019-04-26       Impact factor: 9.261

Review 7.  Rab GTPases take centre stage in understanding Entamoeba histolytica biology.

Authors:  Kuldeep Verma; Vijay Kumar Srivastava; Sunando Datta
Journal:  Small GTPases       Date:  2018-10-13

8.  Kinetics of Histidine-Tagged Protein Association to Nickel-Decorated Liposome Surfaces.

Authors:  Gokul Raghunath; R Brian Dyer
Journal:  Langmuir       Date:  2019-09-09       Impact factor: 3.882

9.  A potential link between insulin signaling and GLUT4 translocation: Association of Rab10-GTP with the exocyst subunit Exoc6/6b.

Authors:  Hiroyuki Sano; Grantley R Peck; Stephanie Blachon; Gustav E Lienhard
Journal:  Biochem Biophys Res Commun       Date:  2015-08-20       Impact factor: 3.575

Review 10.  Alpha-synuclein and intracellular trafficking: impact on the spreading of Parkinson's disease pathology.

Authors:  Sibylle E Eisbach; Tiago F Outeiro
Journal:  J Mol Med (Berl)       Date:  2013-04-25       Impact factor: 4.599

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