Literature DB >> 19521566

The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease.

Te Willnow1, C Antignac, Aw Brändli, Ei Christensen, Rd Cox, D Davidson, Ja Davies, O Devuyst, G Eichele, Nd Hastie, Pj Verroust, A Schedl, Ic Meij.   

Abstract

Rapid progress in genome research creates a wealth of information on the functional annotation of mammalian genome sequences. However, as we accumulate large amounts of scientific information we are facing problems of how to integrate and relate the data produced by various genomic approaches. Here, we propose the novel concept of an organ atlas where diverse data from expression maps to histological findings to mutant phenotypes can be queried, compared and visualized in the context of a three-dimensional reconstruction of the organ. We will seek proof of concept for the organ atlas by elucidating genetic pathways involved in development and pathophysiology of the kidney. Such a kidney atlas may provide a paradigm for a new systems-biology approach in functional genome research aimed at understanding the genetic bases of organ development, physiology and disease.

Entities:  

Keywords:  EuReGene; development; genetics; genome; kidney; pathophysiology

Year:  2005        PMID: 19521566      PMCID: PMC2634085          DOI: 10.4161/org.2.2.2118

Source DB:  PubMed          Journal:  Organogenesis        ISSN: 1547-6278            Impact factor:   2.500


  22 in total

1.  Functional and structural analysis of ClC-K chloride channels involved in renal disease.

Authors:  S Waldegger; T J Jentsch
Journal:  J Biol Chem       Date:  2000-08-11       Impact factor: 5.157

Review 2.  Genetic disorders of renal electrolyte transport.

Authors:  S J Scheinman; L M Guay-Woodford; R V Thakker; D G Warnock
Journal:  N Engl J Med       Date:  1999-04-15       Impact factor: 91.245

Review 3.  CLC chloride channels and transporters.

Authors:  Thomas J Jentsch; Ioana Neagoe; Olaf Scheel
Journal:  Curr Opin Neurobiol       Date:  2005-06       Impact factor: 6.627

4.  WT-1 is required for early kidney development.

Authors:  J A Kreidberg; H Sariola; J M Loring; M Maeda; J Pelletier; D Housman; R Jaenisch
Journal:  Cell       Date:  1993-08-27       Impact factor: 41.582

5.  Epithelial transformation of metanephric mesenchyme in the developing kidney regulated by Wnt-4.

Authors:  K Stark; S Vainio; G Vassileva; A P McMahon
Journal:  Nature       Date:  1994-12-15       Impact factor: 49.962

6.  YAC transgenic analysis reveals Wilms' tumour 1 gene activity in the proliferating coelomic epithelium, developing diaphragm and limb.

Authors:  A W Moore; A Schedl; L McInnes; M Doyle; J Hecksher-Sorensen; N D Hastie
Journal:  Mech Dev       Date:  1998-12       Impact factor: 1.882

7.  A novel claudin 16 mutation associated with childhood hypercalciuria abolishes binding to ZO-1 and results in lysosomal mistargeting.

Authors:  Dominik Müller; P Jaya Kausalya; Felix Claverie-Martin; Iwan C Meij; Paul Eggert; Victor Garcia-Nieto; Walter Hunziker
Journal:  Am J Hum Genet       Date:  2003-11-18       Impact factor: 11.025

8.  Paracellin-1, a renal tight junction protein required for paracellular Mg2+ resorption.

Authors:  D B Simon; Y Lu; K A Choate; H Velazquez; E Al-Sabban; M Praga; G Casari; A Bettinelli; G Colussi; J Rodriguez-Soriano; D McCredie; D Milford; S Sanjad; R P Lifton
Journal:  Science       Date:  1999-07-02       Impact factor: 47.728

9.  Loss of chloride channel ClC-5 impairs endocytosis by defective trafficking of megalin and cubilin in kidney proximal tubules.

Authors:  Erik I Christensen; Olivier Devuyst; Geneviève Dom; Rikke Nielsen; Patrick Van der Smissen; Pierre Verroust; Michèle Leruth; William B Guggino; Pierre J Courtoy
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-18       Impact factor: 12.779

10.  3 dimensional modelling of early human brain development using optical projection tomography.

Authors:  Janet Kerwin; Mark Scott; James Sharpe; Luis Puelles; Stephen C Robson; Margaret Martínez-de-la-Torre; Jose Luis Ferran; Guangjie Feng; Richard Baldock; Tom Strachan; Duncan Davidson; Susan Lindsay
Journal:  BMC Neurosci       Date:  2004-08-06       Impact factor: 3.288

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  1 in total

Review 1.  Big Data in Nephrology.

Authors:  Navchetan Kaur; Sanchita Bhattacharya; Atul J Butte
Journal:  Nat Rev Nephrol       Date:  2021-06-30       Impact factor: 28.314

  1 in total

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