Literature DB >> 19516705

Chromosomal analysis and identification based on optical tweezers and Raman spectroscopy.

Jenifer F Ojeda, Changan Xie, Yong-Qing Li, Fred E Bertrand, John Wiley, Thomas J McConnell.   

Abstract

The ability to identify specific chromosomes with certainty has been established by the development of several cytogenetic techniques based on staining. Here, we report the use of a new optical technique, laser tweezers and Raman spectroscopy (LTRS), to capture and manipulate chromosomes in order to obtain their spectral patterns for molecular analysis without the need for staining. The purpose of this study was to obtain Raman spectroscopy patterns for chromosomes number 1, 2, and 3 and to test if the Raman spectroscopy pattern could be used to distinguish these three chromosomes. In our experiment, optical tweezers were used to capture the individual chromosomes and the Raman spectral patterns were collected for the trapped chromosomes. Then, the captured chromosome was manipulated with the optical tweezers and moved to another chamber through a micro - channel, in which the chromosomes were G- banded for positive identification as chromosome number 1, 2, or 3. Generalized discriminate analysis (GDA) was used to compare the Raman signatures. This analysis revealed that chromosomes 1, 2, and 3 could be distinguished and identified based on their Raman spectra. Development of this approach will lead to more rapid automatic methods for chromosome analysis and identification without the use of prior staining. Moreover, the Raman spectral patterns may lend themselves to more detailed analysis of chromosomal structure than is currently available with standard staining protocols. Such analysis may some day be useful for rapid, automated screening and diagnosis for certain cancers.

Entities:  

Year:  2006        PMID: 19516705     DOI: 10.1364/oe.14.005385

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  4 in total

1.  Raman tweezers spectroscopy of live, single red and white blood cells.

Authors:  Aseefhali Bankapur; Elsa Zachariah; Santhosh Chidangil; Manna Valiathan; Deepak Mathur
Journal:  PLoS One       Date:  2010-04-29       Impact factor: 3.240

2.  Micro-Raman spectroscopy of silver nanoparticle induced stress on optically-trapped stem cells.

Authors:  Aseefhali Bankapur; R Sagar Krishnamurthy; Elsa Zachariah; Chidangil Santhosh; Basavaraj Chougule; Bhavishna Praveen; Manna Valiathan; Deepak Mathur
Journal:  PLoS One       Date:  2012-04-13       Impact factor: 3.240

3.  Shifted-excitation Raman difference spectroscopy for in vitro and in vivo biological samples analysis.

Authors:  Mário Augusto da Silva Martins; Dayana Gonçalves Ribeiro; Edson Aparecido Pereira Dos Santos; Airton Abrahão Martin; Adriana Fontes; Herculano da Silva Martinho
Journal:  Biomed Opt Express       Date:  2010-08-19       Impact factor: 3.732

4.  Infrared nanospectroscopic mapping of a single metaphase chromosome.

Authors:  Ewelina Lipiec; Francesco S Ruggeri; Carine Benadiba; Anna M Borkowska; Jan D Kobierski; Justyna Miszczyk; Bayden R Wood; Glen B Deacon; Andrzej Kulik; Giovanni Dietler; Wojciech M Kwiatek
Journal:  Nucleic Acids Res       Date:  2019-10-10       Impact factor: 16.971

  4 in total

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