Literature DB >> 19509279

Elevated ATF4 expression, in the absence of other signals, is sufficient for transcriptional induction via CCAAT enhancer-binding protein-activating transcription factor response elements.

Jixiu Shan1, Daima Ord, Tõnis Ord, Michael S Kilberg.   

Abstract

Protein limitation in vivo or amino acid deprivation of cells in culture causes a signal transduction cascade consisting of activation of the kinase GCN2 (general control nonderepressible 2), phosphorylation of eukaryotic initiation factor 2, and increased synthesis of activating transcription factor (ATF) 4 by a translational control mechanism. In a self-limiting transcriptional program, ATF4 transiently activates a wide range of downstream target genes involved in transport, cellular metabolism, and other cell functions. Simultaneous activation of other signal transduction pathways by amino acid deprivation led to the question of whether or not the increased abundance of ATF4 alone was sufficient to trigger the transcriptional control mechanisms. Using 293 cells that ectopically express ATF4 in a tetracycline-inducible manner showed that ATF4 target genes were activated in the absence of amino acid deprivation. Ectopic expression of ATF4 alone resulted in effective recruitment of the general transcription machinery, but some reduction in histone modification was observed. These data document that ATF4 alone is sufficient to trigger the amino acid-responsive transcriptional control program. However, the absolute amount of ectopic ATF4 required to achieve the same degree of transcriptional activation observed after amino acid limitation was greater, suggesting that other factors may serve to enhance ATF4 function.

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Year:  2009        PMID: 19509279      PMCID: PMC2755847          DOI: 10.1074/jbc.M109.011338

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  34 in total

1.  ATF4 is a substrate of RSK2 and an essential regulator of osteoblast biology; implication for Coffin-Lowry Syndrome.

Authors:  Xiangli Yang; Koichi Matsuda; Peter Bialek; Sylvie Jacquot; Howard C Masuoka; Thorsten Schinke; Lingzhen Li; Stefano Brancorsini; Paolo Sassone-Corsi; Tim M Townes; Andre Hanauer; Gerard Karsenty
Journal:  Cell       Date:  2004-04-30       Impact factor: 41.582

2.  Induction of IGFBP-1 expression by amino acid deprivation of HepG2 human hepatoma cells involves both a transcriptional activation and an mRNA stabilization due to its 3'UTR.

Authors:  Julien Averous; Anne-Catherine Maurin; Alain Bruhat; Céline Jousse; Céline Arliguie; Pierre Fafournoux
Journal:  FEBS Lett       Date:  2005-04-08       Impact factor: 4.124

Review 3.  Nutritional control of gene expression: how mammalian cells respond to amino acid limitation.

Authors:  M S Kilberg; Y-X Pan; H Chen; V Leung-Pineda
Journal:  Annu Rev Nutr       Date:  2005       Impact factor: 11.848

4.  Transcriptional activity of the human thymidine kinase gene determined by a method using the polymerase chain reaction and an intron-specific probe.

Authors:  K E Lipson; R Baserga
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

Review 5.  Coping with stress: eIF2 kinases and translational control.

Authors:  R C Wek; H-Y Jiang; T G Anthony
Journal:  Biochem Soc Trans       Date:  2006-02       Impact factor: 5.407

6.  Identification of regulatory phosphorylation sites in mitogen-activated protein kinase (MAPK)-activated protein kinase-1a/p90rsk that are inducible by MAPK.

Authors:  K N Dalby; N Morrice; F B Caudwell; J Avruch; P Cohen
Journal:  J Biol Chem       Date:  1998-01-16       Impact factor: 5.157

7.  Amino-acid limitation induces transcription from the human C/EBPbeta gene via an enhancer activity located downstream of the protein coding sequence.

Authors:  Chin Chen; Elizabeth Dudenhausen; Hong Chen; Yuan-Xiang Pan; Altin Gjymishka; Michael S Kilberg
Journal:  Biochem J       Date:  2005-11-01       Impact factor: 3.857

8.  Amino acid deprivation induces the transcription rate of the human asparagine synthetase gene through a timed program of expression and promoter binding of nutrient-responsive basic region/leucine zipper transcription factors as well as localized histone acetylation.

Authors:  Hong Chen; Yuan-Xiang Pan; Elizabeth E Dudenhausen; Michael S Kilberg
Journal:  J Biol Chem       Date:  2004-09-22       Impact factor: 5.157

9.  Induction of CHOP expression by amino acid limitation requires both ATF4 expression and ATF2 phosphorylation.

Authors:  Julien Averous; Alain Bruhat; Céline Jousse; Valérie Carraro; Gerald Thiel; Pierre Fafournoux
Journal:  J Biol Chem       Date:  2003-12-01       Impact factor: 5.157

10.  Translation reinitiation at alternative open reading frames regulates gene expression in an integrated stress response.

Authors:  Phoebe D Lu; Heather P Harding; David Ron
Journal:  J Cell Biol       Date:  2004-10-11       Impact factor: 10.539

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  29 in total

Review 1.  The transcription factor network associated with the amino acid response in mammalian cells.

Authors:  Michael S Kilberg; Mukundh Balasubramanian; Lingchen Fu; Jixiu Shan
Journal:  Adv Nutr       Date:  2012-05-01       Impact factor: 8.701

2.  A mitogen-activated protein kinase/extracellular signal-regulated kinase kinase (MEK)-dependent transcriptional program controls activation of the early growth response 1 (EGR1) gene during amino acid limitation.

Authors:  Jixiu Shan; Mukundh N Balasubramanian; William Donelan; Lingchen Fu; Jaclyn Hayner; Maria-Cecilia Lopez; Henry V Baker; Michael S Kilberg
Journal:  J Biol Chem       Date:  2014-07-15       Impact factor: 5.157

3.  Dynamic changes in genomic histone association and modification during activation of the ASNS and ATF3 genes by amino acid limitation.

Authors:  Mukundh N Balasubramanian; Jixiu Shan; Michael S Kilberg
Journal:  Biochem J       Date:  2013-01-01       Impact factor: 3.857

Review 4.  Sensing and signaling mechanisms linking dietary methionine restriction to the behavioral and physiological components of the response.

Authors:  Laura A Forney; Kirsten P Stone; Desiree Wanders; Thomas W Gettys
Journal:  Front Neuroendocrinol       Date:  2017-12-21       Impact factor: 8.606

5.  Gene expression and integrated stress response in HepG2/C3A cells cultured in amino acid deficient medium.

Authors:  Angelos K Sikalidis; Jeong-In Lee; Martha H Stipanuk
Journal:  Amino Acids       Date:  2010-04-02       Impact factor: 3.520

6.  Growing rats respond to a sulfur amino acid-deficient diet by phosphorylation of the alpha subunit of eukaryotic initiation factor 2 heterotrimeric complex and induction of adaptive components of the integrated stress response.

Authors:  Angelos K Sikalidis; Martha H Stipanuk
Journal:  J Nutr       Date:  2010-03-31       Impact factor: 4.798

7.  Auto-activation of c-JUN gene by amino acid deprivation of hepatocellular carcinoma cells reveals a novel c-JUN-mediated signaling pathway.

Authors:  Lingchen Fu; Mukundh Balasubramanian; Jixiu Shan; Elizabeth E Dudenhausen; Michael S Kilberg
Journal:  J Biol Chem       Date:  2011-08-23       Impact factor: 5.157

Review 8.  Cell intrinsic and extrinsic activators of the unfolded protein response in cancer: Mechanisms and targets for therapy.

Authors:  Feven Tameire; Ioannis I Verginadis; Constantinos Koumenis
Journal:  Semin Cancer Biol       Date:  2015-04-25       Impact factor: 15.707

Review 9.  Emerging tale of UPR and cancer: an essentiality for malignancy.

Authors:  Younis Mohammad Hazari; Arif Bashir; Ehtisham Ul Haq; Khalid Majid Fazili
Journal:  Tumour Biol       Date:  2016-09-14

10.  GCN2- and eIF2α-phosphorylation-independent, but ATF4-dependent, induction of CARE-containing genes in methionine-deficient cells.

Authors:  Kevin M Mazor; Martha H Stipanuk
Journal:  Amino Acids       Date:  2016-09-10       Impact factor: 3.520

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