Literature DB >> 19507069

Strategies for analysis of the glycosylation of proteins: current status and future perspectives.

Susan A Brooks1.   

Abstract

More than half of human proteins are glycosylated by a bewildering array of complex and heterogeneous N- and O-linked glycans. They function in myriad biological processes, including cell adhesion and signalling and influence the physical characteristics, stability, function, activity and immunogenicity of soluble glycoproteins. A single protein may be glycosylated differently to yield heterogenous glycoforms. Glycosylation analysis is of increasing interest in biomedical and biological research, the pharmaceutical and healthcare industry and biotechnology. This is because it is increasingly apparent that glycosylation changes in diseases, such as cancer, making it a promising target for development of clinically useful biomarkers and therapeutics. Furthermore, as the non-human cells employed in expression systems glycosylate their proteins very differently to human cells, and as glycosylation changes unpredictably under changing environmental conditions, glycans analysis for quality control, optimum efficacy and safety of recombinant glycoproteins destined for human therapeutic use is paramount. The complexities of carbohydrate chemistry make analysis challenging and while there are a variety of robust methodologies available for glycan analysis, there is currently a pressing need for the development of new, streamlined, high throughput approaches accessible to non-specialist laboratories.

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Year:  2009        PMID: 19507069     DOI: 10.1007/s12033-009-9184-6

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  97 in total

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Authors:  H Rüdiger; H J Gabius
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Review 2.  Miniaturized separation techniques in glycomic investigations.

Authors:  Yehia Mechref; Milos V Novotny
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2006-06-19       Impact factor: 3.205

3.  Solid-phase oligosaccharide tagging (SPOT): Validation on glycolipid-derived structures.

Authors:  Anders Lohse; Rita Martins; Malene Ryborg Jørgensen; Ole Hindsgaul
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4.  Endo-glycosidase F and peptide N-glycosidase F release the great majority of total cellular N-linked oligosaccharides: use in demonstrating that sulfated N-linked oligosaccharides are frequently found in cultured cells.

Authors:  H H Freeze; A Varki
Journal:  Biochem Biophys Res Commun       Date:  1986-11-14       Impact factor: 3.575

5.  Versatile fluorescent derivatization of glycans for glycomic analysis.

Authors:  Baoyun Xia; Ziad S Kawar; Tongzhong Ju; Richard A Alvarez; Goverdhan P Sachdev; Richard D Cummings
Journal:  Nat Methods       Date:  2005-11       Impact factor: 28.547

6.  High throughput quantitative glycomics and glycoform-focused proteomics of murine dermis and epidermis.

Authors:  Rie Uematsu; Jun-ichi Furukawa; Hiroaki Nakagawa; Yasuro Shinohara; Kisaburo Deguchi; Kenji Monde; Shin-Ichiro Nishimura
Journal:  Mol Cell Proteomics       Date:  2005-09-16       Impact factor: 5.911

7.  Alkali-catalyzed beta-elimination of periodate-oxidized glycans: a novel method of chemical deglycosylation of mucin gene products in paraffin embedded sections.

Authors:  J C Hong; Y S Kim
Journal:  Glycoconj J       Date:  2000-10       Impact factor: 2.916

Review 8.  Rapid, sensitive sequencing of oligosaccharides from glycoproteins.

Authors:  P M Rudd; R A Dwek
Journal:  Curr Opin Biotechnol       Date:  1997-08       Impact factor: 9.740

9.  A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation.

Authors:  Per Hägglund; Jakob Bunkenborg; Felix Elortza; Ole Nørregaard Jensen; Peter Roepstorff
Journal:  J Proteome Res       Date:  2004 May-Jun       Impact factor: 4.466

10.  Polyacrylamide gel electrophoresis of reducing saccharides labeled with the fluorophore 2-aminoacridone: subpicomolar detection using an imaging system based on a cooled charge-coupled device.

Authors:  P Jackson
Journal:  Anal Biochem       Date:  1991-08-01       Impact factor: 3.365

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  25 in total

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Review 2.  Innovative proteomics for the discovery of systemically accessible cancer biomarkers suitable for imaging and targeted therapies.

Authors:  Andrei Turtoi; Edwin De Pauw; Vincent Castronovo
Journal:  Am J Pathol       Date:  2010-12-23       Impact factor: 4.307

3.  O-linked protein glycosylation in Mycoplasma.

Authors:  David S Jordan; James M Daubenspeck; Audra H Laube; Matthew B Renfrow; Kevin Dybvig
Journal:  Mol Microbiol       Date:  2013-10-18       Impact factor: 3.501

Review 4.  Advances and challenges in analytical characterization of biotechnology products: mass spectrometry-based approaches to study properties and behavior of protein therapeutics.

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Journal:  Biotechnol Adv       Date:  2011-05-17       Impact factor: 14.227

Review 5.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

6.  Tracking hydrogen/deuterium exchange at glycan sites in glycoproteins by mass spectrometry.

Authors:  M Guttman; M Scian; K K Lee
Journal:  Anal Chem       Date:  2011-09-06       Impact factor: 6.986

Review 7.  Proteomic analysis in multiple myeloma research.

Authors:  Jana Cumova; Anna Potacova; Zbynek Zdrahal; Roman Hajek
Journal:  Mol Biotechnol       Date:  2011-01       Impact factor: 2.695

8.  Site-Specific Mapping of Sialic Acid Linkage Isomers by Ion Mobility Spectrometry.

Authors:  Miklos Guttman; Kelly K Lee
Journal:  Anal Chem       Date:  2016-05-02       Impact factor: 6.986

9.  All-atom ensemble modeling to analyze small-angle x-ray scattering of glycosylated proteins.

Authors:  Miklos Guttman; Patrick Weinkam; Andrej Sali; Kelly K Lee
Journal:  Structure       Date:  2013-03-05       Impact factor: 5.006

10.  Characterization of host-cell line specific glycosylation profiles of early transmitted/founder HIV-1 gp120 envelope proteins.

Authors:  Eden P Go; Hua-Xin Liao; S Munir Alam; David Hua; Barton F Haynes; Heather Desaire
Journal:  J Proteome Res       Date:  2013-02-20       Impact factor: 4.466

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