Literature DB >> 19505725

The immunoglobulin heavy chain locus in the platypus (Ornithorhynchus anatinus).

F Gambón-Deza1, C Sánchez-Espinel, S Magadán-Mompó.   

Abstract

Immunoglobulins loci in mammals are well known to be organized within a translocon, however their origin remains unresolved. Four of the five classes of immunoglobulins described in humans and rodents (immunoglobulins M, G, E and A-IgM, IgG, IgE and IgA) were found in marsupials and monotremes (immunoglobulin D-IgD was not found) thus showing that the genomic structure of antibodies in mammals has remained constant since its origin. We have recently described the genomic organization of the immunoglobulin heavy chain locus in reptiles (IGHM, IGHD and IGHY). These data and the characterization of the IGH locus in platypus (Ornithorhynchus anatinus), allow us to elucidate the changes that took place in this genomic region during evolution from reptile to mammal. Thus, by using available genome data, we were able to detect that platypus IGH locus contains reptilian and mammalian genes. Besides having an IGHD that is very similar to the one in reptiles and an IGHY, they also present the mammal specific antibody genes IGHG and IGHE, in addition to IGHA. We also detected a pseudogene that originated by recombination between the IGHD and the IGHM (similar to the IGHD2 found in Eublepharis macularius). The analysis of the IGH locus in platypus shows that IGHY was duplicated, firstly by evolving into IGHE and then into IGHG. The IGHA of the platypus has a complex origin, and probably arose by a process of recombination between the IGHM and the IGHY. We detected about 44 VH genes (25 were already described), most of which comprise a single group. When we compared these VH genes with those described in Anolis carolinensis, we find that there is an evolutionary relationship between the VH genes of platypus and the reptilian Group III genes. These results suggest that a fast VH turnover took place in platypus and this gave rise to a family with a high VH gene number and the disappearance of the earlier VH families.

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Year:  2009        PMID: 19505725     DOI: 10.1016/j.molimm.2009.05.025

Source DB:  PubMed          Journal:  Mol Immunol        ISSN: 0161-5890            Impact factor:   4.407


  9 in total

1.  An automated algorithm for extracting functional immunologic V-genes from genomes in jawed vertebrates.

Authors:  David Olivieri; Jose Faro; Bernardo von Haeften; Christian Sánchez-Espinel; Francisco Gambón-Deza
Journal:  Immunogenetics       Date:  2013-06-22       Impact factor: 2.846

2.  Extensive diversification of IgH subclass-encoding genes and IgM subclass switching in crocodilians.

Authors:  Gang Cheng; Yang Gao; Tao Wang; Yi Sun; Zhiguo Wei; Lingxiao Li; Liming Ren; Ying Guo; Xiaoxiang Hu; Yan Lu; Xumin Wang; Guiming Liu; Chenglin Zhang; Jun Yu; Qiang Pan-Hammarström; Lennart Hammarström; Xiaobing Wu; Ning Li; Yaofeng Zhao
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

3.  Platypus TCRμ provides insight into the origins and evolution of a uniquely mammalian TCR locus.

Authors:  Xinxin Wang; Zuly E Parra; Robert D Miller
Journal:  J Immunol       Date:  2011-10-05       Impact factor: 5.422

4.  A preliminary analysis of the immunoglobulin genes in the African elephant (Loxodonta africana).

Authors:  Yongchen Guo; Yonghua Bao; Hui Wang; Xiaoxiang Hu; Zhihui Zhao; Ning Li; Yaofeng Zhao
Journal:  PLoS One       Date:  2011-02-25       Impact factor: 3.240

5.  Gene prediction in the immunoglobulin loci.

Authors:  Vikram Sirupurapu; Yana Safonova; Pavel A Pevzner
Journal:  Genome Res       Date:  2022-05-11       Impact factor: 9.438

6.  Immunoglobulin genes of the turtles.

Authors:  Susana Magadán-Mompó; Christian Sánchez-Espinel; Francisco Gambón-Deza
Journal:  Immunogenetics       Date:  2012-12-04       Impact factor: 2.846

7.  IgH loci of American alligator and saltwater crocodile shed light on IgA evolution.

Authors:  Susana Magadán-Mompó; Christian Sánchez-Espinel; Francisco Gambón-Deza
Journal:  Immunogenetics       Date:  2013-04-05       Impact factor: 2.846

8.  Position and sequence conservation in Amniota of polymorphic enhancer HS1.2 within the palindrome of IgH 3'Regulatory Region.

Authors:  Pietro D'Addabbo; Moira Scascitelli; Vincenzo Giambra; Mariano Rocchi; Domenico Frezza
Journal:  BMC Evol Biol       Date:  2011-03-15       Impact factor: 3.260

9.  Immunoglobulin genomics in the guinea pig (Cavia porcellus).

Authors:  Yongchen Guo; Yonghua Bao; Qingwen Meng; Xiaoxiang Hu; Qingyong Meng; Liming Ren; Ning Li; Yaofeng Zhao
Journal:  PLoS One       Date:  2012-06-22       Impact factor: 3.240

  9 in total

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