Literature DB >> 19505099

970 million druglike small molecules for virtual screening in the chemical universe database GDB-13.

Lorenz C Blum1, Jean-Louis Reymond.   

Abstract

GDB-13 enumerates small organic molecules containing up to 13 atoms of C, N, O, S, and Cl following simple chemical stability and synthetic feasibility rules. With 977,468,314 structures, GDB-13 is the largest publicly available small organic molecule database to date.

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Year:  2009        PMID: 19505099     DOI: 10.1021/ja902302h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  95 in total

1.  Focused enumeration and assessing the structural diversity of scaffold libraries: conformationally restricted bicyclic secondary diamines.

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2.  Structure-Based Screening of Uncharted Chemical Space for Atypical Adenosine Receptor Agonists.

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Review 3.  QSAR without borders.

Authors:  Eugene N Muratov; Jürgen Bajorath; Robert P Sheridan; Igor V Tetko; Dmitry Filimonov; Vladimir Poroikov; Tudor I Oprea; Igor I Baskin; Alexandre Varnek; Adrian Roitberg; Olexandr Isayev; Stefano Curtarolo; Denis Fourches; Yoram Cohen; Alan Aspuru-Guzik; David A Winkler; Dimitris Agrafiotis; Artem Cherkasov; Alexander Tropsha
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Review 4.  Computational methods in drug discovery.

Authors:  Gregory Sliwoski; Sandeepkumar Kothiwale; Jens Meiler; Edward W Lowe
Journal:  Pharmacol Rev       Date:  2013-12-31       Impact factor: 25.468

Review 5.  Exploring chemical space for drug discovery using the chemical universe database.

Authors:  Jean-Louis Reymond; Mahendra Awale
Journal:  ACS Chem Neurosci       Date:  2012-04-25       Impact factor: 4.418

6.  Anatomy of high-performance 2D similarity calculations.

Authors:  Imran S Haque; Vijay S Pande; W Patrick Walters
Journal:  J Chem Inf Model       Date:  2011-09-07       Impact factor: 4.956

7.  Molpher: a software framework for systematic chemical space exploration.

Authors:  David Hoksza; Petr Skoda; Milan Voršilák; Daniel Svozil
Journal:  J Cheminform       Date:  2014-03-21       Impact factor: 5.514

8.  e-LEA3D: a computational-aided drug design web server.

Authors:  Dominique Douguet
Journal:  Nucleic Acids Res       Date:  2010-05-05       Impact factor: 16.971

9.  Tautomerism in large databases.

Authors:  Markus Sitzmann; Wolf-Dietrich Ihlenfeldt; Marc C Nicklaus
Journal:  J Comput Aided Mol Des       Date:  2010-05-29       Impact factor: 3.686

10.  Making Mass Spectrometry See the Light: The Promises and Challenges of Cryogenic Infrared Ion Spectroscopy as a Bioanalytical Technique.

Authors:  Adam P Cismesia; Laura S Bailey; Matthew R Bell; Larry F Tesler; Nicolas C Polfer
Journal:  J Am Soc Mass Spectrom       Date:  2016-03-14       Impact factor: 3.109

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