Literature DB >> 19502344

Deferribacter autotrophicus sp. nov., an iron(III)-reducing bacterium from a deep-sea hydrothermal vent.

G B Slobodkina1, T V Kolganova, N A Chernyh, J Querellou, E A Bonch-Osmolovskaya, A I Slobodkin.   

Abstract

A thermophilic, anaerobic, chemolithoautotrophic bacterium (designated strain SL50(T)) was isolated from a hydrothermal sample collected at the Mid-Atlantic Ridge from the deepest of the known World ocean hydrothermal fields, Ashadze field (1 degrees 58' 21'' N 4 degrees 51' 47'' W) at a depth of 4100 m. Cells of strain SL50(T) were motile, straight to bent rods with one polar flagellum, 0.5-0.6 mum in width and 3.0-3.5 mum in length. The temperature range for growth was 25-75 degrees C, with an optimum at 60 degrees C. The pH range for growth was 5.0-7.5, with an optimum at pH 6.5. Growth of strain SL50(T) was observed at NaCl concentrations ranging from 1.0 to 6.0 % (w/v) with an optimum at 2.5 % (w/v). The generation time under optimal growth conditions for strain SL50(T) was 60 min. Strain SL50(T) used molecular hydrogen, acetate, lactate, succinate, pyruvate and complex proteinaceous compounds as electron donors, and Fe(III), Mn(IV), nitrate or elemental sulfur as electron acceptors. The G+C content of the DNA of strain SL50(T) was 28.7 mol%. 16S rRNA gene sequence analysis revealed that the closest relative of strain SL50(T) was Deferribacter abyssi JR(T) (95.5 % similarity). On the basis of its physiological properties and phylogenetic analyses, the isolate is considered to represent a novel species, for which the name Deferribacter autotrophicus sp. nov. is proposed. The type strain is SL50(T) (=DSM 21529(T)=VKPM B-10097(T)). Deferribacter autotrophicus sp. nov. is the first described deep-sea bacterium capable of chemolithoautotrophic growth using molecular hydrogen as an electron donor and ferric iron as electron acceptor and CO(2) as the carbon source.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19502344     DOI: 10.1099/ijs.0.006767-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

1.  A pyrosequencing-based analysis of microbial diversity governed by ecological conditions in the Winogradsky column.

Authors:  Firouz Abbasian; Robin Lockington; Megharaj Mallavarapu; Ravi Naidu
Journal:  World J Microbiol Biotechnol       Date:  2015-05-07       Impact factor: 3.312

2.  Metatranscriptomic Evidence for Direct Interspecies Electron Transfer between Geobacter and Methanothrix Species in Methanogenic Rice Paddy Soils.

Authors:  Dawn E Holmes; Pravin M Shrestha; David J F Walker; Yan Dang; Kelly P Nevin; Trevor L Woodard; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

3.  Biogeochemical insights into microbe-mineral-fluid interactions in hydrothermal chimneys using enrichment culture.

Authors:  Nolwenn Callac; Olivier Rouxel; Françoise Lesongeur; Céline Liorzou; Claire Bollinger; Patricia Pignet; Sandrine Chéron; Yves Fouquet; Céline Rommevaux-Jestin; Anne Godfroy
Journal:  Extremophiles       Date:  2015-03-17       Impact factor: 2.395

4.  Bacterial lifestyle in a deep-sea hydrothermal vent chimney revealed by the genome sequence of the thermophilic bacterium Deferribacter desulfuricans SSM1.

Authors:  Yoshihiro Takaki; Shigeru Shimamura; Satoshi Nakagawa; Yasuo Fukuhara; Hiroshi Horikawa; Akiho Ankai; Takeshi Harada; Akira Hosoyama; Akio Oguchi; Shigehiro Fukui; Nobuyuki Fujita; Hideto Takami; Ken Takai
Journal:  DNA Res       Date:  2010-02-26       Impact factor: 4.458

5.  Succession in the petroleum reservoir microbiome through an oil field production lifecycle.

Authors:  Adrien Vigneron; Eric B Alsop; Bartholomeus P Lomans; Nikos C Kyrpides; Ian M Head; Nicolas Tsesmetzis
Journal:  ISME J       Date:  2017-05-19       Impact factor: 10.302

6.  Investigation of bacterial communities within the digestive organs of the hydrothermal vent shrimp Rimicaris exoculata provide insights into holobiont geographic clustering.

Authors:  Dominique A Cowart; Lucile Durand; Marie-Anne Cambon-Bonavita; Sophie Arnaud-Haond
Journal:  PLoS One       Date:  2017-03-15       Impact factor: 3.240

7.  Relative Importance of Chemoautotrophy for Primary Production in a Light Exposed Marine Shallow Hydrothermal System.

Authors:  Gonzalo V Gomez-Saez; Petra Pop Ristova; Stefan M Sievert; Marcus Elvert; Kai-Uwe Hinrichs; Solveig I Bühring
Journal:  Front Microbiol       Date:  2017-04-21       Impact factor: 5.640

8.  Desulfovulcanus ferrireducens gen. nov., sp. nov., a thermophilic autotrophic iron and sulfate-reducing bacterium from subseafloor basalt that grows on akaganéite and lepidocrocite minerals.

Authors:  Srishti Kashyap; Masroque Musa; Kaylee A Neat; Deborah A Leopo; James F Holden
Journal:  Extremophiles       Date:  2022-02-21       Impact factor: 3.035

9.  Microbial community composition of a hydrocarbon reservoir 40 years after a CO2 enhanced oil recovery flood.

Authors:  Jenna Lk Shelton; Robert S Andrews; Denise M Akob; Christina A DeVera; Adam Mumford; John E McCray; Jennifer C McIntosh
Journal:  FEMS Microbiol Ecol       Date:  2018-10-01       Impact factor: 4.194

10.  Genomic Insights into the Carbon and Energy Metabolism of a Thermophilic Deep-Sea Bacterium Deferribacter autotrophicus Revealed New Metabolic Traits in the Phylum Deferribacteres.

Authors:  Alexander Slobodkin; Galina Slobodkina; Maxime Allioux; Karine Alain; Mohamed Jebbar; Valerian Shadrin; Ilya Kublanov; Stepan Toshchakov; Elizaveta Bonch-Osmolovskaya
Journal:  Genes (Basel)       Date:  2019-10-26       Impact factor: 4.096

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.