Literature DB >> 19502308

Kocuria halotolerans sp. nov., an actinobacterium isolated from a saline soil in China.

Shu-Kun Tang1, Yun Wang, Kai Lou, Pei-Hong Mao, Li-Hua Xu, Cheng-Lin Jiang, Chang-Jin Kim, Wen-Jun Li.   

Abstract

A Gram-positive actinobacterium, designated strain YIM 90716(T), was isolated from a saline soil sample collected from Ganjiahu Suosuo Forest National Nature Reserve in Xinjiang Province, north-west China. The new isolate contained lysine, glutamic acid and alanine with peptidoglycan type Lys-Ala(3) (variation A3alpha). The major phospholipids were phosphatidylglycerol and diphosphatidylglycerol. The predominant menaqinone was MK-7(H(2)). The major fatty acids were anteiso-C(15 : 0), iso-C(16 : 0) and anteiso-C(17 : 0). The DNA G+C content of strain YIM 90716(T) was 68.0 mol%. Chemotaxonomic properties supported the affiliation of strain YIM 90716(T) to the genus Kocuria. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the organism was related most closely to Kocuria kristinae DSM 20032(T) (96.8 % similarity) and showed lower levels of 16S rRNA gene similarity (<96.5 %) with the type strains of other species of the genus Kocuria. The results of fatty acid analysis and physiological and biochemical tests allowed the genotypic and phenotypic differentiation of strain YIM 90716(T) from its closest relatives. On the basis of data from the present polyphasic study, strain YIM 90716(T) is considered to represent a novel species of the genus Kocuria, for which the name Kocuria halotolerans sp. nov. is proposed. The type strain is YIM 90716(T) (=DSM 18442(T)=KCTC 19172(T)=CCTCC AB 206069(T)).

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Year:  2009        PMID: 19502308     DOI: 10.1099/ijs.0.006627-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

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Review 2.  Performance and Application of 16S rRNA Gene Cycle Sequencing for Routine Identification of Bacteria in the Clinical Microbiology Laboratory.

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Journal:  J Antibiot (Tokyo)       Date:  2014-12-03       Impact factor: 2.649

4.  Persistent bloodstream infection with Kocuria rhizophila related to a damaged central catheter.

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5.  Rothia santali sp. nov., endophytic bacteria isolated from sandalwood (Santalum album L.) seedling.

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6.  Systematic and biotechnological aspects of halophilic and halotolerant actinomycetes.

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Journal:  Extremophiles       Date:  2012-11-06       Impact factor: 2.395

7.  Kocuria marina BS-15 a biosurfactant producing halophilic bacteria isolated from solar salt works in India.

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8.  Complete Genome Sequence of Kocuria palustris MU14/1.

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9.  Draft genome sequence of Kocuria sp. SM24M-10 isolated from coral mucus.

Authors:  Bruna Rafaella Z Palermo; Daniel B A Castro; Letícia Bianca Pereira; Ana Carolina G Cauz; Beatriz L Magalhães; Camila Carlos; Fernanda L P da Costa; Guilherme P Scagion; Juliana S Higa; Ludimila D Almeida; Meiriele da S das Neves; Melina Aparecida Cordeiro; Paula F V do Prado; Thiago M da Silva; Thiago Willian A Balsalobre; Luciana C Paulino; Renato Vicentini; Lúcio F C Ferraz; Laura M M Ottoboni
Journal:  Genom Data       Date:  2015-12-19

10.  Subsurface Microbial Ecology at Sediment-Groundwater Interface in Sulfate-Rich Playa; White Sands National Monument, New Mexico.

Authors:  Mihaela Glamoclija; Steven Ramirez; Kosala Sirisena; Inoka Widanagamage
Journal:  Front Microbiol       Date:  2019-11-12       Impact factor: 5.640

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