Literature DB >> 19495693

Alternative splicing as a therapeutic target for human diseases.

Kenneth J Dery1, Veronica Gusti, Shikha Gaur, John E Shively, Yun Yen, Rajesh K Gaur.   

Abstract

The majority of eukaryotic genes undergo alternative splicing, an evolutionarily conserved phenomenon, to generate functionally diverse protein isoforms from a single transcript. The fact that defective pre-mRNA splicing can generate non-functional and often toxic proteins with catastrophic effects, accurate removal of introns and joining of exons is vital for cell homeostasis. Thus, molecular tools that could either silence a disease-causing gene or regulate its expression in trans will find many therapeutic applications. Here we present two RNA-based approaches, namely RNAi and theophylline-responsive riboswitch that can regulate gene expression by loss-of-function and modulation of splicing, respectively. These strategies are likely to continue to play an integral role in studying gene function and drug discovery.

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Year:  2009        PMID: 19495693      PMCID: PMC3076216          DOI: 10.1007/978-1-60327-295-7_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  40 in total

1.  Mammalian in vitro splicing assays.

Authors:  A Mayeda; A R Krainer
Journal:  Methods Mol Biol       Date:  1999

Review 2.  Pre-mRNA splicing and human disease.

Authors:  Nuno André Faustino; Thomas A Cooper
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

3.  Cleavage of the siRNA passenger strand during RISC assembly in human cells.

Authors:  Philipp J F Leuschner; Stefan L Ameres; Stephanie Kueng; Javier Martinez
Journal:  EMBO Rep       Date:  2006-01-20       Impact factor: 8.807

Review 4.  RNA interference: a potential therapeutic tool for silencing splice isoforms linked to human diseases.

Authors:  Rajesh K Gaur
Journal:  Biotechniques       Date:  2006-04       Impact factor: 1.993

5.  Simultaneous introduction of multiple mutations using overlap extension PCR.

Authors:  L Ge; P Rudolph
Journal:  Biotechniques       Date:  1997-01       Impact factor: 1.993

6.  Theophylline toxicity in Thai children.

Authors:  N Visitsunthorn; K Udomittipong; L Punnakan
Journal:  Asian Pac J Allergy Immunol       Date:  2001-09       Impact factor: 2.310

Review 7.  The carcinoembryonic antigen (CEA) family: structures, suggested functions and expression in normal and malignant tissues.

Authors:  S Hammarström
Journal:  Semin Cancer Biol       Date:  1999-04       Impact factor: 15.707

8.  Activity-dependent regulation of alternative splicing patterns in the rat brain.

Authors:  R Daoud; M Da Penha Berzaghi; F Siedler; M Hübener; S Stamm
Journal:  Eur J Neurosci       Date:  1999-03       Impact factor: 3.386

9.  Alternative splicing of the multidrug resistance protein 1/ATP binding cassette transporter subfamily gene in ovarian cancer creates functional splice variants and is associated with increased expression of the splicing factors PTB and SRp20.

Authors:  Xiaolong He; P L Rachel Ee; John S Coon; William T Beck
Journal:  Clin Cancer Res       Date:  2004-07-15       Impact factor: 12.531

10.  Short artificial hairpins sequester splicing signals and inhibit yeast pre-mRNA splicing.

Authors:  V Goguel; Y Wang; M Rosbash
Journal:  Mol Cell Biol       Date:  1993-11       Impact factor: 4.272

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  6 in total

1.  A serine-arginine-rich (SR) splicing factor modulates alternative splicing of over a thousand genes in Toxoplasma gondii.

Authors:  Lee M Yeoh; Christopher D Goodman; Nathan E Hall; Giel G van Dooren; Geoffrey I McFadden; Stuart A Ralph
Journal:  Nucleic Acids Res       Date:  2015-04-13       Impact factor: 16.971

2.  Mechanistic control of carcinoembryonic antigen-related cell adhesion molecule-1 (CEACAM1) splice isoforms by the heterogeneous nuclear ribonuclear proteins hnRNP L, hnRNP A1, and hnRNP M.

Authors:  Kenneth J Dery; Shikha Gaur; Marieta Gencheva; Yun Yen; John E Shively; Rajesh K Gaur
Journal:  J Biol Chem       Date:  2011-03-11       Impact factor: 5.157

3.  Splice variants of zinc finger protein 695 mRNA associated to ovarian cancer.

Authors:  Sergio Juárez-Méndez; Alejandro Zentella-Dehesa; Vanessa Villegas-Ruíz; Oscar Alberto Pérez-González; Mauricio Salcedo; Ricardo López-Romero; Edgar Román-Basaure; Minerva Lazos-Ochoa; Víctor Edén Montes de Oca-Fuentes; Guelaguetza Vázquez-Ortiz; José Moreno
Journal:  J Ovarian Res       Date:  2013-09-05       Impact factor: 4.234

4.  IRF-1 regulates alternative mRNA splicing of carcinoembryonic antigen-related cell adhesion molecule 1 (CEACAM1) in breast epithelial cells generating an immunoreceptor tyrosine-based inhibition motif (ITIM) containing isoform.

Authors:  Kenneth J Dery; Maciej Kujawski; David Grunert; Xiwei Wu; Tung Ngyuen; Celeste Cheung; John H Yim; John E Shively
Journal:  Mol Cancer       Date:  2014-03-21       Impact factor: 27.401

Review 5.  Leukoencephalopathy with Brainstem and Spinal Cord Involvement and Lactate Elevation: A Novel DARS2 Mutation and Intra-Familial Heterogeneity.

Authors:  Jeng-Lin Li; Ni-Chung Lee; Pin-Shiuan Chen; Gin Hoong Lee; Ruey-Meei Wu
Journal:  Mov Disord Clin Pract       Date:  2021-08-11

6.  Alternative splicing signatures of congenital heart disease and induced pluripotent stem cell-derived cardiomyocytes from congenital heart disease patients.

Authors:  Xiang Xu; Renchao Zou; Xiaoyong Liu; Qianqian Su
Journal:  Medicine (Baltimore)       Date:  2022-08-19       Impact factor: 1.817

  6 in total

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