Literature DB >> 19487679

Measurement of internal body time by blood metabolomics.

Yoichi Minami1, Takeya Kasukawa, Yuji Kakazu, Masayuki Iigo, Masahiro Sugimoto, Satsuki Ikeda, Akira Yasui, Gijsbertus T J van der Horst, Tomoyoshi Soga, Hiroki R Ueda.   

Abstract

Detection of internal body time (BT) via a few-time-point assay has been a longstanding challenge in medicine, because BT information can be exploited to maximize potency and minimize toxicity during drug administration and thus will enable highly optimized medication. To address this challenge, we previously developed the concept, "molecular-timetable method," which was originally inspired by Linné's flower clock. In Linné's flower clock, one can estimate the time of the day by watching the opening and closing pattern of various flowers. Similarly, in the molecular-timetable method, one can measure the BT of the day by profiling the up and down patterns of substances in the molecular timetable. To make this method clinically feasible, we now performed blood metabolome analysis and here report the successful quantification of hundreds of clock-controlled metabolites in mouse plasma. Based on circadian blood metabolomics, we can detect individual BT under various conditions, demonstrating its robustness against genetic background, sex, age, and feeding differences. The power of this method is also demonstrated by the sensitive and accurate detection of circadian rhythm disorder in jet-lagged mice. These results suggest the potential for metabolomics-based detection of BT ("metabolite-timetable method"), which will lead to the realization of chronotherapy and personalized medicine.

Entities:  

Mesh:

Year:  2009        PMID: 19487679      PMCID: PMC2689311          DOI: 10.1073/pnas.0900617106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Inverse relationship between protein intake and plasma free amino acids in healthy men at physical exercise.

Authors:  A H Forslund; L Hambraeus; H van Beurden; U Holmbäck; A E El-Khoury; G Hjorth; R Olsson; M Stridsberg; L Wide; T Akerfeldt; M Regan; V R Young
Journal:  Am J Physiol Endocrinol Metab       Date:  2000-05       Impact factor: 4.310

2.  Changing the dosing schedule minimizes the disruptive effects of interferon on clock function.

Authors:  S Ohdo; S Koyanagi; H Suyama; S Higuchi; H Aramaki
Journal:  Nat Med       Date:  2001-03       Impact factor: 53.440

3.  Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus.

Authors:  Ruth A Akhtar; Akhilesh B Reddy; Elizabeth S Maywood; Jonathan D Clayton; Verdun M King; Andrew G Smith; Timothy W Gant; Michael H Hastings; Charalambos P Kyriacou
Journal:  Curr Biol       Date:  2002-04-02       Impact factor: 10.834

4.  Coordinated transcription of key pathways in the mouse by the circadian clock.

Authors:  Satchidananda Panda; Marina P Antoch; Brooke H Miller; Andrew I Su; Andrew B Schook; Marty Straume; Peter G Schultz; Steve A Kay; Joseph S Takahashi; John B Hogenesch
Journal:  Cell       Date:  2002-05-03       Impact factor: 41.582

5.  Extensive and divergent circadian gene expression in liver and heart.

Authors:  Kai-Florian Storch; Ovidiu Lipan; Igor Leykin; N Viswanathan; Fred C Davis; Wing H Wong; Charles J Weitz
Journal:  Nature       Date:  2002-04-21       Impact factor: 49.962

Review 6.  Coordination of circadian timing in mammals.

Authors:  Steven M Reppert; David R Weaver
Journal:  Nature       Date:  2002-08-29       Impact factor: 49.962

7.  Melatonin in mice: rhythms, response to light, adrenergic stimulation, and metabolism.

Authors:  D J Kennaway; A Voultsios; T J Varcoe; R W Moyer
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2002-02       Impact factor: 3.619

8.  Metabolite profiling for plant functional genomics.

Authors:  O Fiehn; J Kopka; P Dörmann; T Altmann; R N Trethewey; L Willmitzer
Journal:  Nat Biotechnol       Date:  2000-11       Impact factor: 54.908

9.  A transcription factor response element for gene expression during circadian night.

Authors:  Hiroki R Ueda; Wenbin Chen; Akihito Adachi; Hisanori Wakamatsu; Satoko Hayashi; Tomohiro Takasugi; Mamoru Nagano; Ken-ichi Nakahama; Yutaka Suzuki; Sumio Sugano; Masamitsu Iino; Yasufumi Shigeyoshi; Seiichi Hashimoto
Journal:  Nature       Date:  2002-08-01       Impact factor: 49.962

10.  The period length of fibroblast circadian gene expression varies widely among human individuals.

Authors:  Steven A Brown; Fabienne Fleury-Olela; Emi Nagoshi; Conrad Hauser; Cristiana Juge; Christophe A Meier; Rachel Chicheportiche; Jean-Michel Dayer; Urs Albrecht; Ueli Schibler
Journal:  PLoS Biol       Date:  2005-09-27       Impact factor: 8.029

View more
  92 in total

Review 1.  Regulation of metabolism: the circadian clock dictates the time.

Authors:  Saurabh Sahar; Paolo Sassone-Corsi
Journal:  Trends Endocrinol Metab       Date:  2011-12-12       Impact factor: 12.015

2.  Klf15 orchestrates circadian nitrogen homeostasis.

Authors:  Darwin Jeyaraj; Frank A J L Scheer; Jürgen A Ripperger; Saptarsi M Haldar; Yuan Lu; Domenick A Prosdocimo; Sam J Eapen; Betty L Eapen; Yingjie Cui; Ganapathi H Mahabeleshwar; Hyoung-gon Lee; Mark A Smith; Gemma Casadesus; Eric M Mintz; Haipeng Sun; Yibin Wang; Kathryn M Ramsey; Joseph Bass; Steven A Shea; Urs Albrecht; Mukesh K Jain
Journal:  Cell Metab       Date:  2012-03-07       Impact factor: 27.287

3.  The human circadian metabolome.

Authors:  Robert Dallmann; Antoine U Viola; Leila Tarokh; Christian Cajochen; Steven A Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-31       Impact factor: 11.205

4.  Coordination of the transcriptome and metabolome by the circadian clock.

Authors:  Kristin L Eckel-Mahan; Vishal R Patel; Robert P Mohney; Katie S Vignola; Pierre Baldi; Paolo Sassone-Corsi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-19       Impact factor: 11.205

5.  Comparative Circadian Metabolomics Reveal Differential Effects of Nutritional Challenge in the Serum and Liver.

Authors:  Serena Abbondante; Kristin L Eckel-Mahan; Nicholas J Ceglia; Pierre Baldi; Paolo Sassone-Corsi
Journal:  J Biol Chem       Date:  2015-12-07       Impact factor: 5.157

6.  Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data.

Authors:  Stephen Barnes; H Paul Benton; Krista Casazza; Sara J Cooper; Xiangqin Cui; Xiuxia Du; Jeffrey Engler; Janusz H Kabarowski; Shuzhao Li; Wimal Pathmasiri; Jeevan K Prasain; Matthew B Renfrow; Hemant K Tiwari
Journal:  J Mass Spectrom       Date:  2016-07       Impact factor: 1.982

7.  Salivary biomarkers of physical fatigue as markers of sleep deprivation.

Authors:  Darren J Michael; Bianca Valle; Jennifer Cox; John E Kalns; Donovan L Fogt
Journal:  J Clin Sleep Med       Date:  2013-12-15       Impact factor: 4.062

Review 8.  Environmental influences on development of type 2 diabetes and obesity: challenges in personalizing prevention and management.

Authors:  Abby G Ershow
Journal:  J Diabetes Sci Technol       Date:  2009-07-01

9.  High-throughput screening and chemical biology: new approaches for understanding circadian clock mechanisms.

Authors:  Tsuyoshi Hirota; Steve A Kay
Journal:  Chem Biol       Date:  2009-09-25

10.  Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles.

Authors:  Masahiro Sugimoto; David T Wong; Akiyoshi Hirayama; Tomoyoshi Soga; Masaru Tomita
Journal:  Metabolomics       Date:  2009-09-10       Impact factor: 4.290

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.