Literature DB >> 19487010

The effective molarity (EM) puzzle in proton transfer reactions.

Rafik Karaman1.   

Abstract

The DFT and HF calculation results for the proton transfer reactions of three different systems reveal that the reaction mechanism (transfer of a proton to a nucleophile) is largely determined by the distance between the two reactive centers (r). Systems with relatively large r values tend to abstract a proton from a molecule of water, whereas, these with a relatively small r values prefer to be engaged intramolecularly and their interaction with water is only via hydrogen bonding. Further, the results indicate that the effective molarity (logEM) for an intramolecular process is strongly correlated with the distance between the two reacting centers (r) in accordance with Menger's "spatiotemporal hypothesis".

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Year:  2009        PMID: 19487010     DOI: 10.1016/j.bioorg.2009.04.003

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  9 in total

1.  Design, synthesis and in vitro kinetic study of tranexamic acid prodrugs for the treatment of bleeding conditions.

Authors:  Rafik Karaman; Hiba Ghareeb; Khuloud Kamal Dajani; Laura Scrano; Hussein Hallak; Saleh Abu-Lafi; Gennaro Mecca; Sabino A Bufo
Journal:  J Comput Aided Mol Des       Date:  2013-07-24       Impact factor: 3.686

2.  Computationally designed prodrugs of statins based on Kirby's enzyme model.

Authors:  Rafik Karaman; Wajd Amly; Laura Scrano; Gennaro Mecca; Sabino A Bufo
Journal:  J Mol Model       Date:  2013-07-09       Impact factor: 1.810

3.  Computer-assisted design for paracetamol masking bitter taste prodrugs.

Authors:  Hatem Hejaz; Rafik Karaman; Mustafa Khamis
Journal:  J Mol Model       Date:  2011-04-15       Impact factor: 1.810

4.  Prodrugs for masking bitter taste of antibacterial drugs--a computational approach.

Authors:  Rafik Karaman
Journal:  J Mol Model       Date:  2013-02-19       Impact factor: 1.810

5.  Computer-assisted design for atenolol prodrugs for the use in aqueous formulations.

Authors:  Rafik Karaman; Khuloud Dajani; Hussein Hallak
Journal:  J Mol Model       Date:  2011-07-23       Impact factor: 1.810

6.  Prodrugs of aza nucleosides based on proton transfer reaction.

Authors:  Rafik Karaman
Journal:  J Comput Aided Mol Des       Date:  2010-10-13       Impact factor: 3.686

7.  Prodrugs of fumarate esters for the treatment of psoriasis and multiple sclerosis--a computational approach.

Authors:  Rafik Karaman; Ghadeer Dokmak; Maryam Bader; Hussein Hallak; Mustafa Khamis; Laura Scrano; Sabino Aurelio Bufo
Journal:  J Mol Model       Date:  2012-09-02       Impact factor: 1.810

Review 8.  Enzyme Models-From Catalysis to Prodrugs.

Authors:  Zeinab Breijyeh; Rafik Karaman
Journal:  Molecules       Date:  2021-05-28       Impact factor: 4.411

9.  Design, synthesis, and in vitro kinetics study of atenolol prodrugs for the use in aqueous formulations.

Authors:  Rafik Karaman; Alaa Qtait; Khulod Khayyat Dajani; Saleh Abu Lafi
Journal:  ScientificWorldJournal       Date:  2014-01-12
  9 in total

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