Literature DB >> 19485532

A microfluidic mixing system for single-molecule measurements.

Shawn H Pfeil1, Charles E Wickersham, Armin Hoffmann, Everett A Lipman.   

Abstract

This article describes the design and fabrication of a microfluidic mixing system optimized for ultrasensitive optical measurements. Channels are replica-molded in polydimethylsiloxane elastomer and sealed with fused-silica coverglass. The resulting devices have broad chemical compatibility and extremely low fluorescence background, enabling measurements of individual molecules under well-characterized nonequilibrium conditions. Fluid delivery and pressure connections are made using an interface that allows for rapid assembly, rapid sample exchange, and modular device replacement while providing access for high numerical aperture optics.

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Year:  2009        PMID: 19485532     DOI: 10.1063/1.3125643

Source DB:  PubMed          Journal:  Rev Sci Instrum        ISSN: 0034-6748            Impact factor:   1.523


  19 in total

1.  Quantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy.

Authors:  Andrea Soranno; Brigitte Buchli; Daniel Nettels; Ryan R Cheng; Sonja Müller-Späth; Shawn H Pfeil; Armin Hoffmann; Everett A Lipman; Dmitrii E Makarov; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-06       Impact factor: 11.205

2.  Single-molecule spectroscopy of protein folding in a chaperonin cage.

Authors:  Hagen Hofmann; Frank Hillger; Shawn H Pfeil; Armin Hoffmann; Daniel Streich; Dominik Haenni; Daniel Nettels; Everett A Lipman; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-14       Impact factor: 11.205

3.  Microfluidic mixer designed for performing single-molecule kinetics with confocal detection on timescales from milliseconds to minutes.

Authors:  Bengt Wunderlich; Daniel Nettels; Stephan Benke; Jennifer Clark; Sascha Weidner; Hagen Hofmann; Shawn H Pfeil; Benjamin Schuler
Journal:  Nat Protoc       Date:  2013-07-11       Impact factor: 13.491

4.  A comparison of the folding kinetics of a small, artificially selected DNA aptamer with those of equivalently simple naturally occurring proteins.

Authors:  Camille Lawrence; Alexis Vallée-Bélisle; Shawn H Pfeil; Derek de Mornay; Everett A Lipman; Kevin W Plaxco
Journal:  Protein Sci       Date:  2013-11-28       Impact factor: 6.725

5.  Role of denatured-state properties in chaperonin action probed by single-molecule spectroscopy.

Authors:  Hagen Hofmann; Frank Hillger; Cyrille Delley; Armin Hoffmann; Shawn H Pfeil; Daniel Nettels; Everett A Lipman; Benjamin Schuler
Journal:  Biophys J       Date:  2014-12-16       Impact factor: 4.033

Review 6.  Single-molecule Förster resonance energy transfer studies of RNA structure, dynamics and function.

Authors:  Mark Helm; Andrei Yu Kobitski; G Ulrich Nienhaus
Journal:  Biophys Rev       Date:  2009-11-10

7.  Single-molecule spectroscopy reveals chaperone-mediated expansion of substrate protein.

Authors:  Ruth Kellner; Hagen Hofmann; Alessandro Barducci; Bengt Wunderlich; Daniel Nettels; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-27       Impact factor: 11.205

Review 8.  Shedding light on protein folding landscapes by single-molecule fluorescence.

Authors:  Priya R Banerjee; Ashok A Deniz
Journal:  Chem Soc Rev       Date:  2014-02-21       Impact factor: 54.564

9.  Random coil negative control reproduces the discrepancy between scattering and FRET measurements of denatured protein dimensions.

Authors:  Herschel M Watkins; Anna J Simon; Tobin R Sosnick; Everett A Lipman; Rex P Hjelm; Kevin W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

10.  Microfluidic study of competence regulation in Streptococcus mutans: environmental inputs modulate bimodal and unimodal expression of comX.

Authors:  Minjun Son; Sang-Joon Ahn; Qiang Guo; Robert A Burne; Stephen J Hagen
Journal:  Mol Microbiol       Date:  2012-08-16       Impact factor: 3.501

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