Literature DB >> 19485420

Click chemistry and bioorthogonal reactions: unprecedented selectivity in the labeling of biological molecules.

Michael D Best1.   

Abstract

In recent years, a number of bioorthogonal reactions have been developed, exemplified by click chemistry, that enable the efficient formation of a specific product, even within a highly complex chemical environment. While the exquisite selectivity and reliability of these transformations have led to their broad application in diverse research areas, they have proven to be particularly beneficial to biological studies. In this regard, the ability to rationally incorporate reactive tags onto a biomolecular target and subsequently achieve high selectivity in tag derivatization within a complex biological sample has revolutionized the toolbox that is available for addressing fundamental issues. Herein, an introduction to the impact of click chemistry and other bioorthogonal reactions on the study of biological systems is presented. This includes discussion of the philosophy behind click chemistry, the details and benefits of bioorthogonal reactions that have been developed, and examples of recent innovative approaches that have effectively exploited these transformations to study cellular processes. For the latter, the impacts of bioorthogonal reactions on drug design (i.e., in situ combinatorial drug design), biomolecule labeling and detection (site-specific derivatization of proteins, viruses, sugars, DNA, RNA, and lipids), and the recent strategy of activity-based protein profiling are highlighted.

Mesh:

Year:  2009        PMID: 19485420     DOI: 10.1021/bi9007726

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  144 in total

1.  A biosynthetic strategy for re-engineering the Staphylococcus aureus cell wall with non-native small molecules.

Authors:  James W Nelson; Alexander G Chamessian; Patrick J McEnaney; Ryan P Murelli; Barbara I Kazmierczak; Barbara I Kazmiercak; David A Spiegel
Journal:  ACS Chem Biol       Date:  2010-10-05       Impact factor: 5.100

2.  Dynamic metabolic labeling of DNA in vivo with arabinosyl nucleosides.

Authors:  Anne B Neef; Nathan W Luedtke
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

3.  Phosphatidylinositol 3,4,5-trisphosphate activity probes for the labeling and proteomic characterization of protein binding partners.

Authors:  Meng M Rowland; Heidi E Bostic; Denghuang Gong; Anna E Speers; Nathan Lucas; Wonhwa Cho; Benjamin F Cravatt; Michael D Best
Journal:  Biochemistry       Date:  2011-11-30       Impact factor: 3.162

4.  Covalent protein-oligonucleotide conjugates by copper-free click reaction.

Authors:  Santoshkumar L Khatwani; Jun Sung Kang; Daniel G Mullen; Michael A Hast; Lorena S Beese; Mark D Distefano; T Andrew Taton
Journal:  Bioorg Med Chem       Date:  2012-05-17       Impact factor: 3.641

5.  Synthesis of 'clickable' acylhomoserine lactone quorum sensing probes: unanticipated effects on mammalian cell activation.

Authors:  Amanda L Garner; Jing Yu; Anjali Kumari Struss; Colin A Lowery; Jie Zhu; Sook Kyung Kim; Junguk Park; Alexander V Mayorov; Gunnar F Kaufmann; Vladimir V Kravchenko; Kim D Janda
Journal:  Bioorg Med Chem Lett       Date:  2010-12-04       Impact factor: 2.823

6.  Strategies for discovering and derisking covalent, irreversible enzyme inhibitors.

Authors:  Douglas S Johnson; Eranthie Weerapana; Benjamin F Cravatt
Journal:  Future Med Chem       Date:  2010-06       Impact factor: 3.808

7.  "Click" and Olefin Metathesis Chemistry in Water at Room Temperature Enabled by Biodegradable Micelles.

Authors:  Bruce H Lipshutz; Zarko Bošković; Christopher S Crowe; Victoria K Davis; Hannah C Whittemore; David A Vosburg; Anna G Wenzel
Journal:  J Chem Educ       Date:  2013-11-12       Impact factor: 2.979

8.  Acute synthesis of CPEB is required for plasticity of visual avoidance behavior in Xenopus.

Authors:  Wanhua Shen; Han-Hsuan Liu; Lucio Schiapparelli; Daniel McClatchy; Hai-Yan He; John R Yates; Hollis T Cline
Journal:  Cell Rep       Date:  2014-02-13       Impact factor: 9.423

9.  3,6-Substituted-1,2,4,5-tetrazines: tuning reaction rates for staged labeling applications.

Authors:  Danzhu Wang; Weixuan Chen; Yueqin Zheng; Chaofeng Dai; Ke Wang; Bowen Ke; Binghe Wang
Journal:  Org Biomol Chem       Date:  2014-06-21       Impact factor: 3.876

10.  Regioselective covalent immobilization of catalytically active glutathione S-transferase on glass slides.

Authors:  Rajesh Viswanathan; Guillermo R Labadie; C Dale Poulter
Journal:  Bioconjug Chem       Date:  2013-03-26       Impact factor: 4.774

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