Literature DB >> 19482690

Mass spectrometric analysis of histone variants and post-translational modifications.

Benjamin A Garcia1.   

Abstract

Mass spectrometry based proteomics has revolutionized many aspects of modern biological research. One key area where mass spectrometry continues to significantly contribute is in the analysis of histone post-translational modification (PTM) patterns. Dynamic histone PTMs are known to be intricately associated with gene regulation (both activating and silencing), and also with epigenetic processes, therefore, accurate qualitative and quantitative mapping of modification sites on these proteins is of immense value. Mass spectrometry has been utilized to confirm, discover, quantify and determine the simultaneous combination of histone PTMs from many organisms. Here the recent mass spectrometry based studies of histone variants and the characterization of their modifications is reviewed.

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Year:  2009        PMID: 19482690     DOI: 10.2741/S14

Source DB:  PubMed          Journal:  Front Biosci (Schol Ed)        ISSN: 1945-0516


  13 in total

1.  High-sensitivity TFA-free LC-MS for profiling histones.

Authors:  Jia You; Liwen Wang; Motoyasu Saji; Susan V Olesik; Matthew D Ringel; David M Lucas; John C Byrd; Michael A Freitas
Journal:  Proteomics       Date:  2011-08       Impact factor: 3.984

2.  What does the future hold for Top Down mass spectrometry?

Authors:  Benjamin A Garcia
Journal:  J Am Soc Mass Spectrom       Date:  2009-10-29       Impact factor: 3.109

3.  Histone modifiers in cancer: friends or foes?

Authors:  Idan Cohen; Elżbieta Poręba; Kinga Kamieniarz; Robert Schneider
Journal:  Genes Cancer       Date:  2011-06

4.  Sumoylated human histone H4 prevents chromatin compaction by inhibiting long-range internucleosomal interactions.

Authors:  Abhinav Dhall; Sijie Wei; Beat Fierz; Christopher L Woodcock; Tae-Hee Lee; Champak Chatterjee
Journal:  J Biol Chem       Date:  2014-10-06       Impact factor: 5.157

5.  Quantitative mass spectrometry of histones H3.2 and H3.3 in Suz12-deficient mouse embryonic stem cells reveals distinct, dynamic post-translational modifications at Lys-27 and Lys-36.

Authors:  Hye Ryung Jung; Diego Pasini; Kristian Helin; Ole N Jensen
Journal:  Mol Cell Proteomics       Date:  2010-02-11       Impact factor: 5.911

Review 6.  Comprehending dynamic protein methylation with mass spectrometry.

Authors:  Leila Afjehi-Sadat; Benjamin A Garcia
Journal:  Curr Opin Chem Biol       Date:  2013-01-18       Impact factor: 8.822

7.  Identification of combinatorial patterns of post-translational modifications on individual histones in the mouse brain.

Authors:  Ry Y Tweedie-Cullen; Andrea M Brunner; Jonas Grossmann; Safa Mohanna; David Sichau; Paolo Nanni; Christian Panse; Isabelle M Mansuy
Journal:  PLoS One       Date:  2012-05-31       Impact factor: 3.240

8.  Global turnover of histone post-translational modifications and variants in human cells.

Authors:  Barry M Zee; Rebecca S Levin; Peter A DiMaggio; Benjamin A Garcia
Journal:  Epigenetics Chromatin       Date:  2010-12-06       Impact factor: 4.954

9.  Cis-existence of H3K27me3 and H3K36me2 in mouse embryonic stem cells revealed by specific ions of isobaric modification chromatogram.

Authors:  Hailei Mao; Gang Han; Longyong Xu; Duming Zhu; Hanqing Lin; Xiongwen Cao; Yi Yu; Charlie Degui Chen
Journal:  Stem Cell Res Ther       Date:  2015-07-21       Impact factor: 6.832

10.  The histone code of Toxoplasma gondii comprises conserved and unique posttranslational modifications.

Authors:  Sheila C Nardelli; Fa-Yun Che; Natalie C Silmon de Monerri; Hui Xiao; Edward Nieves; Carlos Madrid-Aliste; Sergio O Angel; William J Sullivan; Ruth H Angeletti; Kami Kim; Louis M Weiss
Journal:  mBio       Date:  2013-12-10       Impact factor: 7.867

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