Literature DB >> 19480812

Cluster analysis of the origins of the new influenza A(H1N1) virus.

A Solovyov1, G Palacios, T Briese, W I Lipkin, R Rabadan.   

Abstract

In March and April 2009, a new strain of influenza A(H1N1) virus has been isolated in Mexico and the United States. Since the initial reports more than 10,000 cases have been reported to the World Health Organization, all around the world. Several hundred isolates have already been sequenced and deposited in public databases. We have studied the genetics of the new strain and identified its closest relatives through a cluster analysis approach. We show that the new virus combines genetic information related to different swine influenza viruses. Segments PB2, PB1, PA, HA, NP and NS are related to swine H1N2 and H3N2 influenza viruses isolated in North America. Segments NA and M are related to swine influenza viruses isolated in Eurasia.

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Year:  2009        PMID： 19480812      PMCID： PMC4310691          DOI： 10.2807/ese.14.21.19224-en

Source DB:  PubMed          Journal:  Euro Surveill        ISSN： 1025-496X


  18 in total

1.  Geographic dependence, surveillance, and origins of the 2009 influenza A (H1N1) virus.

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2.  Studies on the origin of pandemic influenza. I. Antigenic analysis of A 2 influenza viruses isolated before and after the appearance of Hong Kong influenza using antisera to the isolated hemagglutinin subunits.

Authors:  R G Webster; W G Laver
Journal:  Virology       Date:  1972-05       Impact factor: 3.616

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Authors:  C Scholtissek; V von Hoyningen; R Rott
Journal:  Virology       Date:  1978-09       Impact factor: 3.616

4.  Comparison of avian and human influenza A viruses reveals a mutational bias on the viral genomes.

Authors:  Raul Rabadan; Arnold J Levine; Harlan Robins
Journal:  J Virol       Date:  2006-09-20       Impact factor: 5.103

5.  Genetic reassortment of avian, swine, and human influenza A viruses in American pigs.

Authors:  N N Zhou; D A Senne; J S Landgraf; S L Swenson; G Erickson; K Rossow; L Liu; K j Yoon; S Krauss; R G Webster
Journal:  J Virol       Date:  1999-10       Impact factor: 5.103

6.  The origin of the recent swine influenza A(H1N1) virus infecting humans.

Authors:  V Trifonov; H Khiabanian; B Greenbaum; R Rabadan
Journal:  Euro Surveill       Date:  2009-04-30

7.  Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-2009.

Authors:  Vivek Shinde; Carolyn B Bridges; Timothy M Uyeki; Bo Shu; Amanda Balish; Xiyan Xu; Stephen Lindstrom; Larisa V Gubareva; Varough Deyde; Rebecca J Garten; Meghan Harris; Susan Gerber; Susan Vagasky; Forrest Smith; Neal Pascoe; Karen Martin; Deborah Dufficy; Kathy Ritger; Craig Conover; Patricia Quinlisk; Alexander Klimov; Joseph S Bresee; Lyn Finelli
Journal:  N Engl J Med       Date:  2009-05-07       Impact factor: 91.245

8.  Avian-to-human transmission of the PB1 gene of influenza A viruses in the 1957 and 1968 pandemics.

Authors:  Y Kawaoka; S Krauss; R G Webster
Journal:  J Virol       Date:  1989-11       Impact factor: 5.103

9.  Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918.

Authors:  Martha I Nelson; Cécile Viboud; Lone Simonsen; Ryan T Bennett; Sara B Griesemer; Kirsten St George; Jill Taylor; David J Spiro; Naomi A Sengamalay; Elodie Ghedin; Jeffery K Taubenberger; Edward C Holmes
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10.  Non-random reassortment in human influenza A viruses.

Authors:  Raul Rabadan; Arnold J Levine; Michael Krasnitz
Journal:  Influenza Other Respir Viruses       Date:  2008-01       Impact factor: 4.380
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  14 in total

Review 1.  Novel vaccines against influenza viruses.

Authors:  S M Kang; J M Song; R W Compans
Journal:  Virus Res       Date:  2011-10-01       Impact factor: 3.303

2.  Protective immunity against H5N1 influenza virus by a single dose vaccination with virus-like particles.

Authors:  Jae-Min Song; Jaber Hossain; Dae-Goon Yoo; Aleksandr S Lipatov; C Todd Davis; Fu-Shi Quan; Li-Mei Chen; Robert J Hogan; Ruben O Donis; Richard W Compans; Sang-Moo Kang
Journal:  Virology       Date:  2010-06-26       Impact factor: 3.616

3.  Longitudinal molecular microbial analysis of influenza-like illness in New York City, May 2009 through May 2010.

Authors:  Rafal Tokarz; Vishal Kapoor; Winfred Wu; Joseph Lurio; Komal Jain; Farzad Mostashari; Thomas Briese; W Ian Lipkin
Journal:  Virol J       Date:  2011-06-09       Impact factor: 4.099

4.  The Contribution of the PB1-F2 Protein to the Fitness of Influenza A Viruses and its Recent Evolution in the 2009 Influenza A (H1N1) Pandemic Virus.

Authors:  Vladimir Trifonov; Vincent Racaniello; Raul Rabadan
Journal:  PLoS Curr       Date:  2009-08-21

5.  Virus-like particle vaccine protects against 2009 H1N1 pandemic influenza virus in mice.

Authors:  Fu-Shi Quan; Aswani Vunnava; Richard W Compans; Sang-Moo Kang
Journal:  PLoS One       Date:  2010-02-11       Impact factor: 3.240

6.  Host Dependent Evolutionary Patterns and the Origin of 2009 H1N1 Pandemic Influenza.

Authors:  Alexander Solovyov; Benjamin Greenbaum; Gustavo Palacios; W Ian Lipkin; Raul Rabadan
Journal:  PLoS Curr       Date:  2010-01-29

7.  Swine- Origin Influenza A (H1N1) Pandemic Revisited.

Authors:  Bc Mathew; Rs Daniel; Iw Campbell
Journal:  Libyan J Med       Date:  2009-09-01       Impact factor: 1.657

8.  Multiple heterologous M2 extracellular domains presented on virus-like particles confer broader and stronger M2 immunity than live influenza A virus infection.

Authors:  Min-Chul Kim; Jong-Seok Lee; Young-Man Kwon; Eunju O; Youn-Jeong Lee; Jun-Gu Choi; Bao-Zhong Wang; Richard W Compans; Sang-Moo Kang
Journal:  Antiviral Res       Date:  2013-06-27       Impact factor: 5.970

9.  From where did the 2009 'swine-origin' influenza A virus (H1N1) emerge?

Authors:  Adrian J Gibbs; John S Armstrong; Jean C Downie
Journal:  Virol J       Date:  2009-11-24       Impact factor: 4.099

10.  Evolutionary trends of A(H1N1) influenza virus hemagglutinin since 1918.

Authors:  Jun Shen; Jianpeng Ma; Qinghua Wang
Journal:  PLoS One       Date:  2009-11-17       Impact factor: 3.240
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