Literature DB >> 19478801

Transposon-mediated genome manipulation in vertebrates.

Zoltán Ivics1, Meng Amy Li, Lajos Mátés, Jef D Boeke, Andras Nagy, Allan Bradley, Zsuzsanna Izsvák.   

Abstract

Transposable elements are DNA segments with the unique ability to move about in the genome. This inherent feature can be exploited to harness these elements as gene vectors for genome manipulation. Transposon-based genetic strategies have been established in vertebrate species over the last decade, and current progress in this field suggests that transposable elements will serve as indispensable tools. In particular, transposons can be applied as vectors for somatic and germline transgenesis, and as insertional mutagens in both loss-of-function and gain-of-function forward mutagenesis screens. In addition, transposons will gain importance in future cell-based clinical applications, including nonviral gene transfer into stem cells and the rapidly developing field of induced pluripotent stem cells. Here we provide an overview of transposon-based methods used in vertebrate model organisms with an emphasis on the mouse system and highlight the most important considerations concerning genetic applications of the transposon systems.

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Year:  2009        PMID: 19478801      PMCID: PMC2867038          DOI: 10.1038/nmeth.1332

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  76 in total

1.  Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition.

Authors:  E M Ostertag; H H Kazazian
Journal:  Genome Res       Date:  2001-12       Impact factor: 9.043

2.  Mechanisms of tolerance to DNA damaging therapeutic drugs.

Authors:  P Karran
Journal:  Carcinogenesis       Date:  2001-12       Impact factor: 4.944

3.  Transposition of the Drosophila hydei Minos transposon in the mouse germ line.

Authors:  Dubravka Drabek; Laskaro Zagoraiou; Ton deWit; An Langeveld; Chariklea Roumpaki; Clio Mamalaki; Charalambos Savakis; Frank Grosveld
Journal:  Genomics       Date:  2003-02       Impact factor: 5.736

4.  Mammalian germ-line transgenesis by transposition.

Authors:  Adam J Dupuy; Karl Clark; Corey M Carlson; Sabine Fritz; Ann E Davidson; Karra M Markley; Ken Finley; Colin F Fletcher; Stephen C Ekker; Perry B Hackett; Sandra Horn; David A Largaespada
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

5.  Human L1 element target-primed reverse transcription in vitro.

Authors:  Gregory J Cost; Qinghua Feng; Alain Jacquier; Jef D Boeke
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

6.  Transposition and gene disruption in the male germline of the mouse.

Authors:  A J Dupuy; S Fritz; D A Largaespada
Journal:  Genesis       Date:  2001-06       Impact factor: 2.487

7.  Common physical properties of DNA affecting target site selection of sleeping beauty and other Tc1/mariner transposable elements.

Authors:  Thomas J Vigdal; Christopher D Kaufman; Zsuzsanna Izsvák; Daniel F Voytas; Zoltán Ivics
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

8.  In vivo transposition of Minos, a Drosophila mobile element, in mammalian tissues.

Authors:  L Zagoraiou; D Drabek; S Alexaki; J A Guy; A G Klinakis; A Langeveld; G Skavdis; C Mamalaki; F Grosveld; C Savakis
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-18       Impact factor: 11.205

9.  Efficient chromosomal transposition of a Tc1/mariner- like transposon Sleeping Beauty in mice.

Authors:  K Horie; A Kuroiwa; M Ikawa; M Okabe; G Kondoh; Y Matsuda; J Takeda
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

10.  Mobilization of a Drosophila transposon in the Caenorhabditis elegans germ line.

Authors:  J L Bessereau; A Wright; D C Williams; K Schuske; M W Davis; E M Jorgensen
Journal:  Nature       Date:  2001-09-06       Impact factor: 49.962

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  126 in total

Review 1.  Transposase-mediated gene modulation in the placenta.

Authors:  Marlee Elston; Johann Urschitz
Journal:  Placenta       Date:  2017-07-29       Impact factor: 3.481

2.  Transposon mutagenesis with coat color genotyping identifies an essential role for Skor2 in sonic hedgehog signaling and cerebellum development.

Authors:  Baiping Wang; Wilbur Harrison; Paul A Overbeek; Hui Zheng
Journal:  Development       Date:  2011-10       Impact factor: 6.868

3.  Tol2-mediated transgenesis in tilapia (Oreochromis niloticus).

Authors:  Koji Fujimura; Thomas D Kocher
Journal:  Aquaculture       Date:  2011-10-01       Impact factor: 4.242

4.  Sleeping Beauty transposon mutagenesis in rat spermatogonial stem cells.

Authors:  Zoltán Ivics; Zsuzsanna Izsvák; Gerardo Medrano; Karen M Chapman; F Kent Hamra
Journal:  Nat Protoc       Date:  2011-09-08       Impact factor: 13.491

5.  Retargeting sleeping beauty transposon insertions by engineered zinc finger DNA-binding domains.

Authors:  Katrin Voigt; Andreas Gogol-Döring; Csaba Miskey; Wei Chen; Toni Cathomen; Zsuzsanna Izsvák; Zoltán Ivics
Journal:  Mol Ther       Date:  2012-07-10       Impact factor: 11.454

6.  Helper-independent piggyBac plasmids for gene delivery approaches: strategies for avoiding potential genotoxic effects.

Authors:  Johann Urschitz; Miyuri Kawasumi; Jesse Owens; Kazuto Morozumi; Hideaki Yamashiro; Ilko Stoytchev; Joel Marh; James A Dee; Kris Kawamoto; Craig J Coates; Joseph M Kaminski; Pawel Pelczar; Ryuzo Yanagimachi; Stefan Moisyadi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-19       Impact factor: 11.205

7.  Sleeping Beauty transposon mutagenesis of the rat genome in spermatogonial stem cells.

Authors:  Zoltán Ivics; Zsuzsanna Izsvák; Karen M Chapman; F Kent Hamra
Journal:  Methods       Date:  2010-12-28       Impact factor: 3.608

8.  mRNA-Initiated, Three-Dimensional DNA Amplifier Able to Function inside Living Cells.

Authors:  Lei He; Danqing Lu; Hao Liang; Sitao Xie; Xiaobing Zhang; Qiaoling Liu; Quan Yuan; Weihong Tan
Journal:  J Am Chem Soc       Date:  2017-12-26       Impact factor: 15.419

9.  CRISPR/Cas9-based Pten knock-out and Sleeping Beauty Transposon-mediated Nras knock-in induces hepatocellular carcinoma and hepatic lipid accumulation in mice.

Authors:  Mingming Gao; Dexi Liu
Journal:  Cancer Biol Ther       Date:  2017-05-17       Impact factor: 4.742

Review 10.  After GWAS: mice to the rescue?

Authors:  Joerg Ermann; Laurie H Glimcher
Journal:  Curr Opin Immunol       Date:  2012-09-29       Impact factor: 7.486

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