Literature DB >> 19478441

Crystallization and preliminary X-ray diffraction analysis of Salmonella typhimurium uridine phosphorylase complexed with 5-fluorouracil.

A A Lashkov1, A G Gabdoulkhakov, A A Shtil, A M Mikhailov.   

Abstract

Uridine phosphorylase (UPh; EC 2.4.2.3) catalyzes the phosphorolytic cleavage of the N-glycosidic bond of uridine to form ribose 1-phosphate and uracil. This enzyme also activates pyrimidine-containing drugs, including 5-fluorouracil (5-FU). In order to better understand the mechanism of the enzyme-drug interaction, the complex of Salmonella typhimurium UPh with 5-FU was cocrystallized using the hanging-drop vapour-diffusion method at 294 K. X-ray diffraction data were collected to 2.2 A resolution. Analysis of these data revealed that the crystal belonged to space group C2, with unit-cell parameters a = 158.26, b = 93.04, c = 149.87 A, alpha = gamma = 90, beta = 90.65 degrees . The solvent content was 45.85% assuming the presence of six hexameric molecules of the complex in the unit cell.

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Year:  2009        PMID: 19478441      PMCID: PMC2688420          DOI: 10.1107/S1744309109016133

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  20 in total

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8.  Isolation and initial characterization of the uridine phosphorylase from Salmonella typhimurium.

Authors:  O K Molchan; N A Dmitrieva; D V Romanova; L E Lopes; V G Debabov; A S Mironov
Journal:  Biochemistry (Mosc)       Date:  1998-02       Impact factor: 2.487

9.  Crystal structures of Escherichia coli uridine phosphorylase in two native and three complexed forms reveal basis of substrate specificity, induced conformational changes and influence of potassium.

Authors:  Tom T Caradoc-Davies; Sue M Cutfield; Iain L Lamont; John F Cutfield
Journal:  J Mol Biol       Date:  2004-03-19       Impact factor: 5.469

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Authors:  Zhe Huang; Ke-Jian Guo; Ren-Xuan Guo; San-Guang He
Journal:  Hepatobiliary Pancreat Dis Int       Date:  2007-06
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  3 in total

1.  Expression, purification, crystallization and preliminary X-ray structure analysis of Vibrio cholerae uridine phosphorylase in complex with thymidine.

Authors:  Alexander A Lashkov; Azat G Gabdulkhakov; Igor I Prokofev; Tatyana A Seregina; Sergey E Sotnichenko; Andrey V Lyashenko; Alexander A Shtil; Alexander S Mironov; Christian Betzel; Al'bert M Mikhailov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-10-30

2.  A novel structural mechanism for redox regulation of uridine phosphorylase 2 activity.

Authors:  Tarmo P Roosild; Samantha Castronovo; Adelbert Villoso; Amy Ziemba; Giuseppe Pizzorno
Journal:  J Struct Biol       Date:  2011-08-10       Impact factor: 2.867

3.  Active site conformational dynamics in human uridine phosphorylase 1.

Authors:  Tarmo P Roosild; Samantha Castronovo
Journal:  PLoS One       Date:  2010-09-14       Impact factor: 3.240

  3 in total

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